PROTEIN: Rep_3012_c_1_696
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Protein File & Metadata
Source:
Rep_3012_c_1_696.pdb
Genome ID:
Protein ID:
Rep_3012_c_1_696
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Protein Sequence
MPTTFTNQAT LSYNNQSIPS NVVTGVLTEV LSVSKTAIPA AYQNGDTITY AVQLVNSGTA 60 ALTGLTLTDN LGAYTPAAGT AAVVPMTYQS DTLRYYRNGI LQATPTIAAT SPLTVTGLSI 120 PAGGNTTLMY AVKTNQFTPY GAEESVTNTA TVTGGEPRRP LTAEATVNAD PAPDLSVIKS 180 MCPTTVTETG VLTYTFTLQN RGATATTATD NVSLTDTFTP ALTITSVTLN GTALTAGTDY 240 TYDGATFRTL TPLLIPAATY TRNATTGEVT VTPGTATLVV TGTV 284
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A829R9Y8 | CBM6 | 3 | 283 | 47 | 591 | 0.4206 |
0.6156 |
| A0A2S9HPB9 | CBM13 | 1 | 281 | 179 | 664 | 0.4181 |
0.6348 |
| AF-A0A0B5RUJ4-F1-model_v4 | CBM13 | 1 | 277 | 177 | 657 | 0.418 |
0.6413 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A829R9Y8 | CBM6 | 3 | 283 | 47 | 591 | 0.4206 |
0.6156 |
| A0A2S9HPB9 | CBM13 | 1 | 281 | 179 | 664 | 0.4181 |
0.6348 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9AIS7-F1-model_v4 | 1 | 284 | 232 | 555 | 0.4098 |
0.5511 |
| AF-Q548P6-F1-model_v4 | 3 | 284 | 222 | 545 | 0.4078 |
0.549 |