PROTEIN: Rep_3012_c_1_2348
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Protein File & Metadata
Source:
Rep_3012_c_1_2348.pdb
Genome ID:
Protein ID:
Rep_3012_c_1_2348
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Protein Sequence
MKFRITKNHV DAFCVLIGVL GMGSLYFQVL RMPLMAAMLI ASILLLTRAH HPKISVQNVR 60 LTLLLTAALL LTSFVNPQNG IRINDIVIWL CNIGYVLVLQ SCIGYRTYMR LYTKVMLAEA 120 AISLISFVIG DLLSLPLPLL HYEVSSVNGF YLTPYFTLGW LNIPVFHRNA GMFNEPGSHQ 180 IFLNFALLFL MSDETRMGMS KKKYCWEIAL LIVTILSTLS TTGFICLGVV LLTVAFRKKG 240 GKMARSIKMA AFIGLILLFV IESATGVVER KIVGRNSGGS FYTRWNDTFS GFEIGLESPI 300 AGQGVFSERK AEILLEHRVQ NISNGFAAFV MDTGLILPAV WLWLTYRGIR TKFAKARLLY 360 VLGVFLLYFL CINTEGVFLN ILFLGLLGKW QPDAEDTPDQ QANARSQKKR RWRCTVPPEK 420 LRLTFNTQPE DAAQEQTGET GGEES 445
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 3 | 402 | 15 | 451 | 0.5199 |
0.7238 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UII34295.1 | GT4 | 4 | 402 | 13 | 422 | 0.5214 |
0.7378 |
| A0A517MXC4 | GT26 | 3 | 402 | 15 | 451 | 0.5199 |
0.7238 |
| K0J022 | GT4 | 4 | 398 | 4 | 401 | 0.4954 |
0.699 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q02729-F1-model_v4 | 1 | 409 | 1 | 412 | 0.6165 |
0.6784 |
| AF-Q6F7F9-F1-model_v4 | 2 | 396 | 4 | 404 | 0.5956 |
0.7456 |
| AF-Q6FFS6-F1-model_v4 | 4 | 393 | 18 | 420 | 0.5886 |
0.756 |