PROTEIN: Rep_3006_c_95_3
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Protein File & Metadata
Source:
Rep_3006_c_95_3.pdb
Genome ID:
Protein ID:
Rep_3006_c_95_3
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Protein Sequence
MKKTLSLLAL TLVLSLLAPC LAVAEDEPIV MNLWLNRTID RQVDPESEIY QYFHDYILEN 60 TGVDVVLNYY DWGDTYNQKM NMYAAGQDLP SGVWMFSEPV KDSFTLSILN FMGEAGMFYD 120 WMPYVEDTET YTTLMENASE TFISMTRSKT TGELYVYPCN IHYAYPHAPG GWTVRKDWME 180 QVGAEYPTNE EEMYQLLKTF KEEITDVNGN PVIPFALCGF DDAVEEYVMR FILNSWMGSG 240 VWYEHDGRYD YAKYTKIEEL TQAMLFFNKL WNEDLMDKET FSQTPEMFIE KCVNGQIGVH 300 GYSYVTTYTA SDVLMEESNG EAYFVAMPPV SMNENLPVEE VNSCEIVTVP MNCVVVTREG 360 VSEEEMAAYA KVIDFCGIYE NNRLFNNGIE GQDYEYVDGE MQLTAEYIEK RDTIPNFTDV 420 NGYGVFAAWN TNPQVMAESL KCTVTQKDRK ESCDNLAGHQ VAIDDAINAV IPGEIEMEKQ 480 PLIENAWTQM IIKAISAPSA EECEAIVAAW PEQLEALGYE EWVAERTEIA NAAMGEE 537
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 24 | 537 | 33 | 502 | 0.744 |
0.8358 |
| AF-A0A133D019-F1-model_v4 | 28 | 537 | 36 | 485 | 0.6916 |
0.7961 |
| AF-P76042-F1-model_v4 | 17 | 529 | 17 | 430 | 0.6469 |
0.7602 |
| AF-Q8DNH8-F1-model_v4 | 25 | 528 | 30 | 419 | 0.6348 |
0.7761 |
| AF-K0F002-F1-model_v4 | 26 | 529 | 45 | 439 | 0.6206 |
0.7657 |
| AF-Q9CBN6-F1-model_v4 | 24 | 529 | 34 | 445 | 0.6179 |
0.742 |
| AF-Q8DNN7-F1-model_v4 | 29 | 533 | 34 | 437 | 0.6139 |
0.7431 |
| AF-Q8DNU2-F1-model_v4 | 26 | 532 | 36 | 445 | 0.607 |
0.732 |
| AF-Q8DRJ6-F1-model_v4 | 25 | 537 | 58 | 509 | 0.6018 |
0.7109 |
| AF-K0F1Y0-F1-model_v4 | 28 | 529 | 51 | 433 | 0.6016 |
0.7582 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 25 | 537 | 42 | 506 | 0.7243 |
0.8256 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 19 | 537 | 21 | 745 | 0.5028 |
0.6111 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 25 | 537 | 42 | 506 | 0.7243 |
0.8256 |
| A0A7U1BNH7 | GH10 | 19 | 537 | 21 | 745 | 0.5028 |
0.6111 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5suo-assembly1.cif.gz_A | 28 | 537 | 1 | 450 | 0.7264 |
0.8074 |
| 6fth-assembly1.cif.gz_A | 24 | 537 | 1 | 496 | 0.7203 |
0.7712 |
| 3omb-assembly1.cif.gz_A | 24 | 537 | 3 | 503 | 0.715 |
0.7639 |
| 5xs8-assembly1.cif.gz_A | 28 | 534 | 1 | 474 | 0.6987 |
0.7648 |
| 5g5y-assembly1.cif.gz_A | 25 | 536 | 1 | 488 | 0.6954 |
0.7556 |
| 7eho-assembly2.cif.gz_B | 29 | 529 | 1 | 402 | 0.6843 |
0.7982 |
| 5h6u-assembly1.cif.gz_A | 25 | 537 | 3 | 486 | 0.6792 |
0.7401 |
| 4tqu-assembly1.cif.gz_Q | 25 | 537 | 7 | 489 | 0.6777 |
0.7431 |
| 6jhx-assembly2.cif.gz_B | 25 | 537 | 6 | 483 | 0.6765 |
0.7421 |
| 5g62-assembly2.cif.gz_B | 29 | 537 | 1 | 489 | 0.6742 |
0.7305 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 21 | 537 | 28 | 501 | 0.7421 |
0.8279 |
| AF-Q795R2-F1-model_v4 | 23 | 537 | 35 | 498 | 0.7073 |
0.8023 |
| AF-A0A0H2URD6-F1-model_v4 | 23 | 536 | 42 | 532 | 0.6777 |
0.759 |
| AF-Q7LYW7-F1-model_v4 | 3 | 532 | 14 | 450 | 0.6556 |
0.751 |
| AF-Q8FVS7-F1-model_v4 | 19 | 529 | 16 | 411 | 0.6511 |
0.7795 |
| AF-Q578M8-F1-model_v4 | 19 | 529 | 16 | 411 | 0.6491 |
0.777 |
| AF-Q2YKZ9-F1-model_v4 | 16 | 529 | 13 | 411 | 0.6479 |
0.7709 |
| AF-P76042-F1-model_v4 | 17 | 529 | 17 | 430 | 0.6469 |
0.7602 |
| AF-Q00749-F1-model_v4 | 16 | 528 | 23 | 420 | 0.6292 |
0.7574 |
| AF-O32156-F1-model_v4 | 27 | 532 | 29 | 422 | 0.62 |
0.7549 |