PROTEIN: Rep_3006_c_62_8
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Protein File & Metadata
Source:
Rep_3006_c_62_8.pdb
Genome ID:
Protein ID:
Rep_3006_c_62_8
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Protein Sequence
MNTKKFAIRG LVILAVVVAL CMFFSGTIRT IATAKVRITR AQQGKMRQQI SLSGELTFLE 60 EEEVFVDASG QSLQVTKVNV LPGYQVAAGD VIFEAEIADY EKTMSDKRAE YESSYMELMD 120 LEQANGSTRL SRTDTLWAEA YYALSDATQA ALEKQIAMET LLAYENLDLD ENGAVPETAS 180 DELKQAVTDW NAAKASQAEA EEAMQQASRY SVPEATRTYI TQRKELNDKL AQLESDMLAL 240 SVAQKELGAV RAPADGYIVN VGVKKGESFD PSGAAYSYCP LETLPVLRAD ISDIEVNISS 300 GMAAAFSTSR GRELESEVAS TGVTVDGNRY ADIALDEGLI DDMGGAYSLL QNATNITIEY 360 RAQTNTSLIA SSAVRGSGDE RYVYIIRQQQ STFGTMSMVT EKLAVTVLAE IDGVCSIAED 420 ISYYDIAYME DRPISENMTV MQYTN 445
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GR78-F1-model_v4 | 1 | 445 | 9 | 360 | 0.5777 |
0.6782 |
| AF-Q0PAR1-F1-model_v4 | 1 | 443 | 1 | 383 | 0.5409 |
0.6033 |
| AF-Q9I6X6-F1-model_v4 | 1 | 445 | 19 | 366 | 0.5303 |
0.6372 |
| AF-Q5F6V5-F1-model_v4 | 1 | 445 | 1 | 382 | 0.5219 |
0.5901 |
| AF-Q9I191-F1-model_v4 | 9 | 436 | 12 | 390 | 0.5184 |
0.5866 |
| AF-Q8ZQE5-F1-model_v4 | 5 | 444 | 9 | 371 | 0.5165 |
0.5946 |
| AF-P75830-F1-model_v4 | 6 | 445 | 6 | 370 | 0.5165 |
0.5925 |
| AF-A0A0H3H3T2-F1-model_v4 | 9 | 445 | 22 | 373 | 0.5138 |
0.6081 |
| AF-A0A0H3GQL5-F1-model_v4 | 10 | 445 | 11 | 371 | 0.5132 |
0.5937 |
| AF-P52477-F1-model_v4 | 16 | 445 | 26 | 364 | 0.512 |
0.6287 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nik-assembly1.cif.gz_D | 30 | 441 | 1 | 340 | 0.512 |
0.5938 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P58411-F1-model_v4 | 1 | 445 | 3 | 371 | 0.5524 |
0.6247 |
| AF-Q9KJC3-F1-model_v4 | 13 | 445 | 23 | 367 | 0.5173 |
0.6191 |
| AF-P75830-F1-model_v4 | 6 | 445 | 6 | 370 | 0.5165 |
0.5925 |
| AF-O31099-F1-model_v4 | 6 | 445 | 21 | 365 | 0.5159 |
0.6235 |
| AF-P25196-F1-model_v4 | 22 | 445 | 32 | 366 | 0.5148 |
0.6268 |
| AF-P64176-F1-model_v4 | 6 | 445 | 6 | 370 | 0.513 |
0.5889 |
| AF-P52477-F1-model_v4 | 16 | 445 | 26 | 364 | 0.512 |
0.6287 |
| AF-Q9KWV5-F1-model_v4 | 16 | 445 | 26 | 365 | 0.5102 |
0.6249 |
| AF-Q9WWZ9-F1-model_v4 | 13 | 445 | 23 | 364 | 0.5094 |
0.6235 |
| AF-Q88N30-F1-model_v4 | 13 | 445 | 23 | 363 | 0.5094 |
0.6245 |