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PROTEIN: Rep_3006_c_61_16

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Protein File & Metadata
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Source:
Rep_3006_c_61_16.pdb
Genome ID:
Rep_3006
Protein ID:
Rep_3006_c_61_16

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Protein Sequence 
MNLMDTMSGS   LLESFFPQGW   DLDKMDACIG   APEDVLARQA   HWNEGFAPVP   CDSLADFDVL 60
MGHEIAMQVK   QTRDEGRKCA   FILPVGPMGM   YRWTVYFLRA   WNVDCHHVTT   FNMDEWADGD 120
GNTLPSSNPA   AFQYAMEQAL   FCPLGELTVP   PEQRNFATRA   NLPTYPQKIA   ALRAEGAKLV 180
LVYGVGRMCH   IAFWEPHFAA   EFATAEEWKR   QPYRLGARLH   PLTIEQNAIT   SFKSRTTLVP 240
CRANTIGPGL   FLGADYAIGG   CDGVLSRGMQ   WQGLSFWATL   RYGPDMWVPS   SFVPTLPGKL 300
FFHRELAGPL   VAECN 315
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P42912-F1-model_v4 31 306 9 251 0.7614 0.888
AF-A0A132YZ81-F1-model_v4 46 310 1 233 0.7595 0.8867
AF-Q2G0K8-F1-model_v4 46 310 1 242 0.7594 0.8908
AF-Q04802-F1-model_v4 46 310 1 245 0.758 0.8723
AF-Q9XVJ2-F1-model_v4 46 310 1 246 0.7537 0.8959
AF-Q54XK9-F1-model_v4 46 311 1 251 0.7513 0.876
AF-Q8DPA1-F1-model_v4 46 310 1 233 0.7509 0.8812
AF-Q8ZQX7-F1-model_v4 46 310 1 247 0.7508 0.8876
AF-A0A0H3GK04-F1-model_v4 46 310 1 247 0.7505 0.8873
AF-Q32IQ2-F1-model_v4 46 310 1 247 0.7504 0.8871
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 46 297 1 280 0.5667 0.7086
AF-G0IWQ0-F1-model_v4 CE9 46 311 1 245 0.5232 0.8891
AF-A0A0H4PAS9-F1-model_v4 CE9 46 312 1 246 0.5229 0.8862
AF-A0A1W2H3T6-F1-model_v4 CE9 46 310 1 243 0.5195 0.89
AF-J9UUU6-F1-model_v4 CE9 46 311 1 240 0.5017 0.8817
AF-K0JLB5-F1-model_v4 CE9 46 310 1 239 0.4983 0.8797
AF-A0A3B6VIU1-F1-model_v4 CE9 46 310 1 239 0.4974 0.8778
AF-D8I9Y7-F1-model_v4 CE9 46 310 1 239 0.4971 0.8772
AF-D5U6N5-F1-model_v4 CE9 46 310 1 239 0.4971 0.8771
AF-G0ELA3-F1-model_v4 CE9 46 310 1 239 0.4969 0.8767
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 46 297 1 280 0.5667 0.7086
A0A0H4PAS9 CE9 46 312 1 246 0.5229 0.8862
A0A3B6VIU1 CE9 46 310 1 239 0.4974 0.8778
U5ECU6 CE9 42 310 388 631 0.4913 0.8444
A0A871RFD9 GH3 23 310 970 1250 0.4461 0.7978
A0A875S4F4 GH3 33 311 831 1287 0.4411 0.8007
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 46 310 1 241 0.777 0.8939
5hj5-assembly2.cif.gz_B 46 311 1 248 0.7523 0.8875
4tm7-assembly1.cif.gz_A 43 310 1 243 0.7442 0.8541
7lqn-assembly2.cif.gz_I 43 310 1 248 0.7413 0.8665
7lqm-assembly2.cif.gz_D 46 311 1 248 0.7408 0.8743
3oc6-assembly1.cif.gz_A 43 310 1 243 0.7404 0.851
7lqm-assembly1.cif.gz_A 46 310 1 243 0.7388 0.8744
1cd5-assembly1.cif.gz_A 46 310 1 247 0.7361 0.8716
1ne7-assembly1.cif.gz_E 46 310 1 247 0.7353 0.8825
3tx2-assembly1.cif.gz_A 41 310 1 246 0.7341 0.8405
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q97MK9-F1-model_v4 46 310 1 241 0.7829 0.8996
AF-C3L2N7-F1-model_v4 46 310 1 241 0.7809 0.9027
AF-C1FV12-F1-model_v4 46 310 1 241 0.7807 0.9024
AF-A8MIX7-F1-model_v4 46 310 1 241 0.7806 0.8972
AF-B1IKY4-F1-model_v4 46 310 1 241 0.78 0.9018
AF-Q4L9T8-F1-model_v4 46 310 1 242 0.78 0.8955
AF-A7FX73-F1-model_v4 46 310 1 241 0.7797 0.9014
AF-A5I5R9-F1-model_v4 46 310 1 241 0.7795 0.9012
AF-B1KZ07-F1-model_v4 46 310 1 241 0.7794 0.9011
AF-A7GH51-F1-model_v4 46 310 1 241 0.7793 0.901
Download Full SwissProt Results