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PROTEIN: Rep_3006_c_27_28

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Protein File & Metadata
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Source:
Rep_3006_c_27_28.pdb
Genome ID:
Rep_3006
Protein ID:
Rep_3006_c_27_28

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRKMAWLVA   LVLALGTFSG   VALAEEEPVV   LKYYRSGTTD   AEIDESIETY   QRLHQVALEQ 60
ANVDLQLELF   DWGDSYNQTL   MMHAAAGDLP   SGVWTLGGIS   NTYATELINN   MGMAGMLYDW 120
TDVVNDEENF   PTLAKNAEEH   FIQMAICPED   GKLYGLPAER   HGAFPHAPGG   ISLRKDWLEE 180
LGMDFPTNEQ   ELYDVIVAFK   ENFTNDAGAE   IAPVSFTGFD   NFTYWLNSWM   GTCMWTQNDA 240
GEWMYGKYAK   QDELTMALVF   LNRLWREGLM   DKESFSQTNE   QVITKGANGS   FGVTSFSYNT 300
TYSINDSFYA   TDPDSNKYFV   SCPTFSCNPD   LPAEEVNSVE   IVSVPFNRTV   ITTNGIDEET 360
FYRLAKAIDW   IGTYDASLML   LMGFEGSEWE   YEEGTNRKVR   TEEWTENVAA   RVNYQYNAGL 420
CYWSSLNSNI   DAMYDLLAAI   CVRKSDIESV   ANIQGHQIAI   SDPMNIVAAG   PIEAEYMSLI 480
EDAWQDMVIQ   AISADSEAAC   RAALEAWPDT   LNGLHYAEIV   EERIETCESF   GLEV 534
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 23 532 33 502 0.7586 0.8486
AF-A0A133D019-F1-model_v4 27 534 36 485 0.6651 0.7645
AF-A0A0H3GKJ8-F1-model_v4 5 523 8 406 0.6344 0.752
AF-A0A133CSA1-F1-model_v4 8 519 13 427 0.6319 0.7382
AF-A0A133CDW9-F1-model_v4 26 525 42 444 0.629 0.7663
AF-A0A132ZDH4-F1-model_v4 22 516 25 427 0.6228 0.7459
AF-Q8DNU8-F1-model_v4 23 526 35 441 0.6132 0.7395
AF-Q8DNH8-F1-model_v4 26 525 31 419 0.6127 0.7497
AF-A0A133CKQ7-F1-model_v4 26 526 37 419 0.609 0.7544
AF-A0A0H3GHK7-F1-model_v4 24 529 18 433 0.6005 0.7073
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 534 42 506 0.7212 0.8205
AF-A0A7U1BNH7-F1-model_v4 GH10 26 534 28 745 0.4747 0.5857
AF-A0A1B0VLS2-F1-model_v4 CBM0 24 534 541 961 0.4591 0.7309
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 534 42 506 0.7212 0.8205
K8EJG7 CBM50 , CE4 27 526 34 417 0.595 0.7353
A0A7U1BNH7 GH10 26 534 28 745 0.4747 0.5857
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 25 534 1 493 0.7314 0.7816
6fth-assembly1.cif.gz_A 24 534 1 496 0.7226 0.7704
3omb-assembly1.cif.gz_A 25 534 5 503 0.7217 0.7691
5xs8-assembly1.cif.gz_A 28 534 1 474 0.6962 0.7602
5suo-assembly1.cif.gz_A 28 533 1 451 0.6938 0.7707
5g62-assembly2.cif.gz_B 28 534 1 491 0.6858 0.7374
5h6u-assembly1.cif.gz_A 25 534 3 487 0.6847 0.7427
4tqu-assembly1.cif.gz_Q 25 534 6 490 0.6829 0.7439
3vlw-assembly2.cif.gz_B 24 534 4 489 0.6807 0.7385
6jhx-assembly2.cif.gz_B 25 534 6 483 0.6775 0.7411
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 22 533 29 502 0.752 0.8355
AF-Q795R2-F1-model_v4 21 531 34 498 0.7342 0.8284
AF-A0A0H2URD6-F1-model_v4 22 534 41 537 0.708 0.7798
AF-Q53684-F1-model_v4 24 529 24 429 0.6162 0.7493
AF-O06989-F1-model_v4 26 526 33 417 0.6106 0.7521
AF-Q00749-F1-model_v4 25 525 32 420 0.6094 0.7457
AF-P59214-F1-model_v4 25 526 37 423 0.5951 0.7348
AF-P59213-F1-model_v4 23 526 35 423 0.5926 0.7285
AF-P9WGU9-F1-model_v4 27 522 31 463 0.5873 0.6884
AF-O34335-F1-model_v4 28 530 30 424 0.5791 0.704
Download Full SwissProt Results