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PROTEIN: Rep_3006_c_16_6

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Protein File & Metadata
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Source:
Rep_3006_c_16_6.pdb
Genome ID:
Rep_3006
Protein ID:
Rep_3006_c_16_6

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Protein Sequence 
MKRLRRILCV   VLLMCQALCA   VAESGEENQM   DNIILDADFS   QGAWIYSPAK   PMRMTGKLPL 60
SDSEEDPEWL   LTQWNSKNNI   RGTQAQVVDG   AYIYENEYKT   VARDAQGVLT   LRVNASEEYH 120
RVRTSKMDSW   VHLYFEQRYA   NPYPLAGMGS   APLRLSFCVP   EFRDATPEGE   LDPSLHAAIA 180
VFYVILKDMN   PQSPAYGDFI   NFCVMLYDNR   TPVTPESLFV   DSGQNPIDAT   NMMIYTMDSS 240
TYAGEVYADG   VWHDIDIDLM   PYFQHALRET   QERGYMAGTK   MEDLCISSVF   FGFEVPGVMD 300
CELRVRDLSL   GLKPVEE 317
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1C1D2C0-F1-model_v4 40 314 47 313 0.5243 0.6275
AF-U7PY07-F1-model_v4 39 314 54 326 0.5125 0.6138
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-E0SSM3-F1-model_v4 GH12 25 317 2 300 0.5962 0.6647
AF-D9PZ33-F1-model_v4 GH12 27 316 3 291 0.5936 0.645
AF-A0A109V5N4-F1-model_v4 GH12 27 316 3 291 0.5888 0.6408
AF-O08428-F1-model_v4 GH12 40 316 1 257 0.5866 0.6675
AF-Q9S5X8-F1-model_v4 GH12 40 316 1 258 0.586 0.6661
AF-P96491-F1-model_v4 GH12 40 316 1 257 0.586 0.6673
AF-Q60032-F1-model_v4 GH12 40 316 1 257 0.5859 0.6667
AF-A0A0F6ALT7-F1-model_v4 GH12 40 316 1 258 0.5859 0.6659
AF-Q4J7S3-F1-model_v4 GH12 27 313 28 311 0.5725 0.6507
AF-A0A0B5KLE4-F1-model_v4 GH12 39 316 15 273 0.5724 0.6645
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
E0SSM3 GH12 25 317 2 300 0.5962 0.6647
A0A109V5N4 GH12 27 316 3 291 0.5888 0.6408
A0A6M3M9J5 GH12 40 314 1 239 0.5783 0.6927
A0A0C4F820 GH12 1 313 1 303 0.5774 0.615
A0A3R8D1B6 GH12 42 315 18 242 0.5724 0.7111
AHC52035.1 GH12 28 316 33 319 0.5718 0.6497
A0A1C8ZTY8 GH12 28 316 33 318 0.5716 0.6515
T2H1C4 GH12 39 315 19 247 0.5705 0.7047
F2L0W2 GH12 40 312 1 252 0.5705 0.6555
A1S0U6 GH12 28 317 31 313 0.5702 0.6613
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2vg9-assembly1.cif.gz_A 40 313 1 217 0.5921 0.7225
2c1f-assembly1.cif.gz_A 40 313 1 219 0.5919 0.7198
2jem-assembly2.cif.gz_B 42 313 1 232 0.5911 0.7007
7w3v-assembly1.cif.gz_A 40 313 1 222 0.5881 0.7097
1oa3-assembly4.cif.gz_D 40 313 1 218 0.5863 0.7125
3b7m-assembly1.cif.gz_A 40 312 1 216 0.5858 0.7156
3vhn-assembly7.cif.gz_G 40 315 1 256 0.5853 0.6669
3amq-assembly1.cif.gz_A 40 315 1 256 0.5851 0.6675
1oa2-assembly6.cif.gz_F 40 313 1 218 0.5841 0.7105
2nlr-assembly1.cif.gz_A 40 314 1 222 0.5838 0.7047
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q12679-F1-model_v4 19 313 2 239 0.5734 0.6754
AF-W2PEP3-F1-model_v4 36 313 14 241 0.5698 0.699
AF-G4ZHR2-F1-model_v4 38 313 15 241 0.5651 0.6954
AF-W2PDG1-F1-model_v4 40 313 17 238 0.5636 0.7022
AF-O94218-F1-model_v4 42 313 21 238 0.5633 0.7132
AF-Q5BG78-F1-model_v4 40 313 19 239 0.5623 0.706
AF-A1XP58-F1-model_v4 40 313 20 241 0.5612 0.7038
AF-A2Q877-F1-model_v4 40 313 20 241 0.5612 0.7032
AF-G4N5V2-F1-model_v4 39 314 34 264 0.5391 0.681
AF-G4NBX2-F1-model_v4 40 314 37 260 0.4921 0.6843
Download Full SwissProt Results