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PROTEIN: Rep_3006_c_13_9

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Protein File & Metadata
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Source:
Rep_3006_c_13_9.pdb
Genome ID:
Rep_3006
Protein ID:
Rep_3006_c_13_9

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRKNLIAWL   VALALLLSGT   ALAAEKELVV   YSEEDLARAK   EYTDTLDTSG   KTYDEHLTIE 60
LATEMLDATQ   DYNQGSAGSQ   WFTEHFNFDF   DLVAIPDSNA   NDKIRTMINS   GEVPDVLRWN 120
GFDINEIISY   IDQGLFYRLP   DDWEERWPNI   AHTQSLVPVA   DALAEKVDGT   YGLFRVVMYH 180
YYPGDVVVSH   NSIYIREDWA   NAVGFEIKDA   YTPSELLEYA   RLIKEQDPGQ   VGANLVPIAS 240
DTGYLANLFL   GSTYPEYNQI   YRTEDGQYHW   GFSDPQTLEG   LKLWKEAYDE   GLISPEFYVY 300
SETDAVNTFS   ISGVAGAVLN   AGSVCGSVKD   GFANDQGLDE   TAWHQAAMIG   EDGYYHDYAN 360
DNFWGVTYFS   ADIDEKVFER   YMDIVDFMVS   DNGADFRCNG   MRYIDWDFNE   DGTRSMVYDT 420
SVYRRASDSN   FWPVYTLLGA   CGDDNGFNPD   PVDASEDALF   YANQLNAVYN   AKLSRLTDNS 480
IIERDWESYG   FYSDAQTALT   AIDYRTIMAN   LVVGEGDLEE   NWQSIISENA   YIIDPALQEL 540
NETFNSGAE 549
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 51 548 32 501 0.7303 0.8268
AF-A0A133D019-F1-model_v4 55 549 36 484 0.6699 0.7804
AF-K0EWS5-F1-model_v4 54 538 24 455 0.635 0.7438
AF-P76042-F1-model_v4 53 539 24 430 0.6335 0.7614
AF-A0A132ZDH4-F1-model_v4 52 535 27 427 0.6276 0.7617
AF-A0A133CSA1-F1-model_v4 51 536 23 427 0.625 0.7531
AF-A0A133CPC5-F1-model_v4 52 540 30 423 0.6234 0.7655
AF-A0A133CDW9-F1-model_v4 55 543 42 444 0.6224 0.7666
AF-K0F002-F1-model_v4 54 539 45 439 0.6212 0.7721
AF-Q8DNU8-F1-model_v4 53 540 36 440 0.618 0.755
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 51 549 42 506 0.7106 0.8176
A0A9Q8PNJ5 GH4 1 540 255 866 0.4994 0.6254
AF-A0A7U1BNH7-F1-model_v4 GH10 54 548 27 745 0.4879 0.6236
UJP10085.1 GH154 50 516 703 1167 0.3399 0.5646
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 51 549 42 506 0.7106 0.8176
K8EJG7 CBM50 , CE4 55 543 32 417 0.5993 0.7437
A0A9Q8PNJ5 GH4 1 540 255 866 0.4994 0.6254
A0A7U1BNH7 GH10 54 548 27 745 0.4879 0.6236
UJP10085.1 GH154 50 516 703 1167 0.3399 0.5646
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 54 548 1 495 0.7283 0.7843
5xs8-assembly1.cif.gz_A 56 545 1 473 0.7197 0.7926
3omb-assembly1.cif.gz_A 54 547 5 500 0.719 0.7804
4tqu-assembly1.cif.gz_Q 40 548 1 491 0.7139 0.7748
6jhx-assembly2.cif.gz_B 41 548 1 482 0.7103 0.7772
5h6u-assembly1.cif.gz_A 47 548 1 485 0.7099 0.7759
5g5y-assembly1.cif.gz_A 54 547 1 488 0.7095 0.7751
3vlw-assembly2.cif.gz_B 44 549 1 487 0.7089 0.7736
5g62-assembly2.cif.gz_B 57 547 1 486 0.7045 0.7689
5suo-assembly1.cif.gz_A 56 548 1 448 0.6931 0.7823
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 52 548 31 502 0.7429 0.838
AF-Q795R2-F1-model_v4 51 546 36 496 0.7187 0.8265
AF-A0A0H2URD6-F1-model_v4 49 547 39 532 0.699 0.783
AF-Q8FVS7-F1-model_v4 54 540 22 411 0.6525 0.7956
AF-Q578M8-F1-model_v4 54 540 22 411 0.652 0.7947
AF-Q2YKZ9-F1-model_v4 54 540 22 411 0.6504 0.7934
AF-P76042-F1-model_v4 53 539 24 430 0.6335 0.7614
AF-Q7LYW7-F1-model_v4 50 543 37 450 0.6271 0.7581
AF-O31518-F1-model_v4 50 539 27 427 0.626 0.7611
AF-Q9RUE8-F1-model_v4 53 543 17 420 0.619 0.7418
Download Full SwissProt Results