PROTEIN: Rep_3005_c_5_52
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Protein File & Metadata
Source:
Rep_3005_c_5_52.pdb
Genome ID:
Protein ID:
Rep_3005_c_5_52
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Protein Sequence
MSKQQDAFLA RRFGVFNHFL YSAPSSRPDT LAAQPTPDWN ACVEHFDVED MARRLHAVGA 60 GYYWITIMQG RKYMLAPNAA FDAIAGTKPG EACAHRDLIA DLAEALARYD IDLFLYFTGD 120 GPYLDVEIGK KFGLYEPRKH VTMDFVAKWA SVLREYAMRY GTGVKGWWID GCYRDFLGYT 180 EELLTPYYEA CKAGNPDCLV AMNNGVKPDF RKYYSKEEIT AGEFNDFAVL PPSRFIDGAQ 240 AHILAPLGIS ADGSEWGGWR RPGLKRSKEY MLDYVRRANA VGMPVTIDIF VGHDASWDAE 300 QKAALQYIGE RL 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F914-F1-model_v4 | 2 | 312 | 1 | 370 | 0.6552 |
0.7862 |
| AF-Q99LJ1-F1-model_v4 | 1 | 312 | 33 | 348 | 0.6517 |
0.7826 |
| AF-Q6NY93-F1-model_v4 | 1 | 312 | 34 | 350 | 0.6504 |
0.7805 |
| AF-Q1LUJ4-F1-model_v4 | 1 | 312 | 34 | 350 | 0.6499 |
0.78 |
| AF-F1QWD0-F1-model_v4 | 1 | 312 | 30 | 347 | 0.6497 |
0.7811 |
| AF-Q551C1-F1-model_v4 | 1 | 312 | 33 | 353 | 0.6469 |
0.7809 |
| AF-Q6AYS4-F1-model_v4 | 1 | 312 | 35 | 352 | 0.6451 |
0.7797 |
| AF-A0A0K0E0I1-F1-model_v4 | 1 | 312 | 26 | 341 | 0.6437 |
0.7796 |
| AF-P17164-F1-model_v4 | 1 | 312 | 42 | 358 | 0.6433 |
0.7793 |
| AF-P10901-F1-model_v4 | 1 | 312 | 30 | 353 | 0.6432 |
0.7789 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6B8RPI7-F1-model_v4 | GH0 | 2 | 312 | 1 | 311 | 0.9052 |
0.9192 |
| AF-A0A5B9EHG3-F1-model_v4 | GH0 | 5 | 312 | 1 | 302 | 0.8777 |
0.9128 |
| AF-A0A7G8C1E4-F1-model_v4 | GH0 | 5 | 312 | 1 | 302 | 0.8771 |
0.9122 |
| AF-A0A5B9WHQ2-F1-model_v4 | GH0 | 1 | 312 | 31 | 342 | 0.8723 |
0.9248 |
| AF-A0A7D4ULW4-F1-model_v4 | GH0 | 1 | 312 | 19 | 325 | 0.8653 |
0.9117 |
| AF-G8TG22-F1-model_v4 | GH0 | 1 | 312 | 21 | 326 | 0.8648 |
0.9159 |
| A0A8F9TVG0 | GH0 | 1 | 312 | 11 | 323 | 0.8614 |
0.8987 |
| AF-A9KKJ3-F1-model_v4 | GH0 | 2 | 312 | 1 | 308 | 0.8579 |
0.8853 |
| AF-A0A5B9W4A0-F1-model_v4 | GH0 | 1 | 312 | 34 | 330 | 0.8573 |
0.9441 |
| A0A9X7VSI3 | GH0 | 3 | 312 | 38 | 324 | 0.8137 |
0.913 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A068NP65 | GH29 | 1 | 312 | 2 | 316 | 0.7791 |
0.8059 |
| A0A0B5HJ40 | GH29 | 1 | 312 | 9 | 325 | 0.757 |
0.8041 |
| QYY36601.1 | GH29 | 1 | 312 | 10 | 328 | 0.7502 |
0.8059 |
| D5EN70 | GH29 | 1 | 312 | 26 | 341 | 0.7486 |
0.802 |
| WFR59285.1 | GH29 | 1 | 312 | 6 | 306 | 0.7437 |
0.8113 |
| AYA93351.1 | GH29 | 1 | 312 | 20 | 325 | 0.7405 |
0.7946 |
| A0A412NWY3 | GH29 | 1 | 312 | 32 | 352 | 0.7369 |
0.8018 |
| A0A1H1YTC8 | GH29 | 1 | 312 | 26 | 342 | 0.7356 |
0.7906 |
| QUO31265.1 | GH29 | 2 | 312 | 2 | 356 | 0.7259 |
0.7945 |
| A0A481ZG92 | GH29 | 3 | 312 | 4 | 329 | 0.7246 |
0.77 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6o1j-assembly1.cif.gz_A | 1 | 312 | 1 | 324 | 0.7398 |
0.7802 |
| 6o1c-assembly2.cif.gz_B | 2 | 312 | 1 | 319 | 0.7392 |
0.7758 |
| 6o1j-assembly1.cif.gz_E | 2 | 312 | 1 | 322 | 0.7386 |
0.7799 |
| 6o1c-assembly1.cif.gz_G | 3 | 312 | 1 | 317 | 0.7383 |
0.7756 |
| 6o1a-assembly2.cif.gz_D-2 | 2 | 312 | 1 | 317 | 0.7378 |
0.7721 |
| 6o1a-assembly1.cif.gz_A-3 | 2 | 312 | 1 | 322 | 0.7378 |
0.7788 |
| 6o1c-assembly2.cif.gz_F | 3 | 312 | 1 | 317 | 0.7377 |
0.7742 |
| 6o1c-assembly1.cif.gz_D | 2 | 312 | 1 | 323 | 0.7377 |
0.7797 |
| 6o18-assembly2.cif.gz_D-2 | 2 | 312 | 1 | 318 | 0.7371 |
0.7727 |
| 6o1j-assembly3.cif.gz_F | 1 | 312 | 1 | 318 | 0.737 |
0.7708 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C3YWU0-F1-model_v4 | 1 | 312 | 27 | 345 | 0.6531 |
0.7826 |
| AF-Q99LJ1-F1-model_v4 | 1 | 312 | 33 | 348 | 0.6517 |
0.7826 |
| AF-Q6AYS4-F1-model_v4 | 1 | 312 | 35 | 352 | 0.6451 |
0.7797 |
| AF-P48300-F1-model_v4 | 1 | 312 | 46 | 362 | 0.6436 |
0.7813 |
| AF-P17164-F1-model_v4 | 1 | 312 | 42 | 358 | 0.6433 |
0.7793 |
| AF-P10901-F1-model_v4 | 1 | 312 | 30 | 353 | 0.6432 |
0.7789 |
| AF-Q99KR8-F1-model_v4 | 1 | 312 | 37 | 354 | 0.6431 |
0.7785 |
| AF-Q5RFI5-F1-model_v4 | 1 | 312 | 41 | 358 | 0.643 |
0.7807 |
| AF-P04066-F1-model_v4 | 1 | 312 | 46 | 362 | 0.6427 |
0.7812 |
| AF-Q2KIM0-F1-model_v4 | 1 | 312 | 49 | 365 | 0.6426 |
0.7818 |