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PROTEIN: Rep_3005_c_18_6

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Protein File & Metadata
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Source:
Rep_3005_c_18_6.pdb
Genome ID:
Rep_3005
Protein ID:
Rep_3005_c_18_6

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRKNLIAWL   VALALLLSGT   ALAAEKELVV   YSEEDLARAK   EYTDTLDTSG   KTYDEHLTIE 60
LATEMLDATQ   DYNQGSAGSQ   WFTEHFNFDF   DLVAIPDSNA   NDKIRTMINS   GEVPDVLRWN 120
GFDINEIISY   IDQGLFYRLP   DDWEERWPNI   AHTQSLVPVA   DALAEKVDGT   YGLFRVVMYH 180
YYPGDVVVSH   NSIYIREDWA   NAVGFEIKDA   YTPSELLEYA   RLIKEQDPGQ   VGANLVPIAS 240
DTGYLANLFL   GSTYPEYNQI   YRTEDGQYHW   GFSDPQTLEG   LKLWKEAYDE   GLISPEFYVY 300
SETDAVNTFS   ISGVAGAVLN   PGSVCGSVKD   GFANDQGLDE   TAWHQAAMIG   EDGYYHDYAN 360
DNFWGVTYFS   ADIDEKVFER   YMDIVDFMVS   DNGADFRCNG   MRYIDWDFNE   DGTRSMVYDT 420
SVYRRASDSN   FWPVYTLLGA   CGDDNGFNPD   PVDASEDALF   YANQLNAVYN   AKLSRLTDNS 480
IIERDWESYG   FYSDAQTALT   AIDYRTIMAN   LVVGEGDLEE   NWQSIISENA   YIIDPALQEL 540
NETFNSDAE 549
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 3 548 6 501 0.7382 0.796
AF-A0A133D019-F1-model_v4 55 549 36 484 0.6596 0.7687
AF-K0EWS5-F1-model_v4 54 541 24 456 0.632 0.7383
AF-P76042-F1-model_v4 52 540 23 430 0.6312 0.7569
AF-A0A133CSA1-F1-model_v4 51 536 23 427 0.6308 0.7598
AF-A0A132ZDH4-F1-model_v4 53 536 27 427 0.626 0.7594
AF-Q8DNU8-F1-model_v4 53 540 36 438 0.6122 0.7508
AF-A0A133CDW9-F1-model_v4 55 543 42 444 0.6107 0.7518
AF-K0F002-F1-model_v4 55 539 45 439 0.609 0.7583
AF-A0A133CPC5-F1-model_v4 52 540 30 423 0.6068 0.7453
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 51 549 40 506 0.688 0.7894
AF-K8EJG7-F1-model_v4 CBM50 , CE4 55 543 32 417 0.5862 0.7279
A0A9Q8PNJ5 GH4 1 540 370 866 0.4907 0.6599
AF-A0A7U1BNH7-F1-model_v4 GH10 54 548 26 745 0.4773 0.609
UJP10085.1 GH154 50 514 703 1168 0.3302 0.5458
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 51 549 40 506 0.688 0.7894
K8EJG7 CBM50 , CE4 55 543 32 417 0.5862 0.7279
A0A9Q8PNJ5 GH4 1 540 370 866 0.4907 0.6599
A0A7U1BNH7 GH10 54 548 26 745 0.4773 0.609
A0A242CSU4 CBM35 26 547 163 984 0.4558 0.619
UJP10085.1 GH154 50 514 703 1168 0.3302 0.5458
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 54 547 1 492 0.7299 0.7899
3omb-assembly1.cif.gz_A 54 547 5 500 0.7218 0.7831
5g5y-assembly1.cif.gz_A 54 547 1 488 0.7216 0.7871
5xs8-assembly1.cif.gz_A 57 545 1 472 0.6945 0.7681
4tqu-assembly1.cif.gz_Q 40 549 1 488 0.6899 0.755
5h6u-assembly1.cif.gz_A 48 549 1 485 0.6874 0.753
6jhx-assembly2.cif.gz_B 40 548 1 482 0.6859 0.7523
5suo-assembly1.cif.gz_A 56 548 1 448 0.6856 0.7745
3vlw-assembly2.cif.gz_B 40 549 1 487 0.6841 0.7485
5g62-assembly2.cif.gz_B 57 547 1 486 0.6829 0.7479
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 52 548 31 502 0.7338 0.8287
AF-Q795R2-F1-model_v4 51 548 36 498 0.7332 0.8382
AF-A0A0H2URD6-F1-model_v4 49 547 39 532 0.7074 0.7918
AF-O31518-F1-model_v4 50 539 26 427 0.6358 0.771
AF-Q8FVS7-F1-model_v4 55 540 23 411 0.6348 0.7769
AF-Q578M8-F1-model_v4 55 540 22 411 0.6338 0.774
AF-Q2YKZ9-F1-model_v4 55 540 22 411 0.6323 0.7722
AF-P76042-F1-model_v4 52 540 23 430 0.6312 0.7569
AF-Q7LYW7-F1-model_v4 51 543 37 450 0.6092 0.737
AF-Q53684-F1-model_v4 55 539 26 423 0.6037 0.7561
Download Full SwissProt Results