PROTEIN: Rep_2980_c_92_3
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Protein File & Metadata
Source:
Rep_2980_c_92_3.pdb
Genome ID:
Protein ID:
Rep_2980_c_92_3
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Protein Sequence
MDKKVYSVTD FGAVGDGVTD DGLAIGRALQ TVLEDPFEGI KELRFECERV YRVCETPPTC 60 NKRRLFTMEK ARHIHLCGCG CKLLFTGDAK LLSAHDCEDI RLSGMVIDYE PRPFILATVT 120 RTDPENAVLE LEADEDIGLT ERFDPPEWWF AFPNRTDIRG HYFIRRMEPL GERRYRLTIH 180 ENTAARVREA KPGDRFLLPI IGGSHFAGSM CEILGNNGFA IENLRIYSMP EFGFDVRLNR 240 GSCSFTNVAL CPREDEEEQL VSWRDGFHIK DNLDPIVWNH CYIGPLGDDA FNLSCVYLDV 300 TAVSADGAEI HAHPAEVGDT RALAPGDEYV AYDMAHGREL GRGRAAEVFP SDVDVHFTVD 360 TPMPALQPGM QIAFYKYANP NYLVKDSTIT GTVRVRSSGT FENCRFDVFW VRIENEFFVE 420 GPIPRDVTFR NCTFTTPYEA DAPIFHVGTV GLNGLTDCEY KCTGIRLENC VFEKGTTEIE 480 PGNEVVICP 489
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9SYK6-F1-model_v4 | 1 | 489 | 23 | 360 | 0.6141 |
0.7958 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCM94416.1 | GH110 | 1 | 489 | 1 | 509 | 0.8486 |
0.9139 |
| AF-A0A7G8UU52-F1-model_v4 | GH110 | 1 | 489 | 19 | 525 | 0.8422 |
0.9072 |
| AF-A0A6P1M9R5-F1-model_v4 | GH110 | 1 | 489 | 24 | 533 | 0.8399 |
0.8931 |
| AF-A0A6P1M5M2-F1-model_v4 | GH110 | 1 | 489 | 17 | 542 | 0.8298 |
0.9012 |
| AF-A0A0P0GUC2-F1-model_v4 | GH110 | 1 | 489 | 43 | 548 | 0.823 |
0.8949 |
| AF-A0A3T1D0B1-F1-model_v4 | GH110 | 2 | 489 | 1 | 525 | 0.8199 |
0.879 |
| AF-A0A6P1M5W1-F1-model_v4 | GH110 | 1 | 489 | 26 | 555 | 0.8197 |
0.8996 |
| AF-A0A0G3EDR0-F1-model_v4 | GH110 | 1 | 489 | 53 | 559 | 0.8179 |
0.8875 |
| A0A3D9KG80 | GH110 | 2 | 489 | 1 | 527 | 0.8158 |
0.877 |
| AF-A0A6P1MEB6-F1-model_v4 | GH110 | 1 | 489 | 22 | 530 | 0.8147 |
0.8833 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCM94416.1 | GH110 | 1 | 489 | 1 | 509 | 0.8486 |
0.9139 |
| A0A7G8UU52 | GH110 | 1 | 489 | 19 | 525 | 0.8422 |
0.9072 |
| A0A6P1M9R5 | GH110 | 1 | 489 | 24 | 533 | 0.8399 |
0.8931 |
| A0A6P1M5M2 | GH110 | 1 | 489 | 17 | 542 | 0.8298 |
0.9012 |
| A0A0P0GUC2 | GH110 | 1 | 489 | 43 | 548 | 0.823 |
0.8949 |
| A0A6P1M5W1 | GH110 | 1 | 489 | 26 | 555 | 0.8197 |
0.8996 |
| A0A3D9KG80 | GH110 | 2 | 489 | 1 | 527 | 0.8158 |
0.877 |
| W0JAB4 | GH110 | 1 | 489 | 26 | 534 | 0.8134 |
0.8955 |
| W0J654 | GH110 | 1 | 489 | 9 | 516 | 0.8117 |
0.9016 |
| UAM98308.1 | GH110 | 1 | 489 | 41 | 556 | 0.8113 |
0.8929 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7jwf-assembly2.cif.gz_C-2 | 3 | 489 | 1 | 529 | 0.7676 |
0.8495 |
| 7jwf-assembly1.cif.gz_A | 3 | 489 | 1 | 530 | 0.7664 |
0.8495 |
| 7jw4-assembly2.cif.gz_B | 2 | 489 | 4 | 538 | 0.7615 |
0.8468 |
| 7jw4-assembly1.cif.gz_A-2 | 2 | 489 | 1 | 538 | 0.7605 |
0.8459 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5LGZ8-F1-model_v4 | 1 | 489 | 22 | 564 | 0.7711 |
0.858 |
| AF-Q64XV2-F1-model_v4 | 1 | 489 | 22 | 564 | 0.7704 |
0.8575 |
| AF-B1KD83-F1-model_v4 | 1 | 489 | 28 | 548 | 0.7686 |
0.8626 |
| AF-A6KWM0-F1-model_v4 | 1 | 489 | 19 | 561 | 0.7681 |
0.8535 |
| AF-A6L2M8-F1-model_v4 | 1 | 489 | 19 | 561 | 0.765 |
0.8572 |
| AF-A6LFT2-F1-model_v4 | 1 | 489 | 21 | 559 | 0.7515 |
0.8469 |
| AF-Q8A2Z5-F1-model_v4 | 1 | 489 | 13 | 529 | 0.7483 |
0.8178 |
| AF-Q89ZX0-F1-model_v4 | 1 | 489 | 22 | 550 | 0.7475 |
0.844 |
| AF-Q5L7M8-F1-model_v4 | 1 | 489 | 21 | 547 | 0.7335 |
0.823 |
| AF-Q64MU6-F1-model_v4 | 1 | 489 | 21 | 547 | 0.7327 |
0.8221 |