PROTEIN: Rep_2978_c_36_6
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Protein File & Metadata
Source:
Rep_2978_c_36_6.pdb
Genome ID:
Protein ID:
Rep_2978_c_36_6
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Protein Sequence
MKKLSALILT VLVLAAALCG CGGSSDAPDT TGTTPAPAAD KTDGKAAVDT ALPATYEIAA 60 TDPHYIISTP DWKAEGYGCG FALNEKGNKE YAIVVACGSS TDESPLADAF ATLYNDTFNG 120 ILMQNYRAKY EQFIPATTAI TLKDGSPALL FEDVQPADDY GTKMSCPVYG YSFSHDGVPF 180 IVAYIVVNES AADSAKRTEM KGYVDDMINT VRTAQ 215
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1NJ53-F1-model_v4 | 11 | 215 | 20 | 231 | 0.5248 |
0.5947 |
| AF-X8FF16-F1-model_v4 | 42 | 212 | 72 | 235 | 0.5233 |
0.7203 |
| AF-B6ST36-F1-model_v4 | 1 | 215 | 39 | 241 | 0.4921 |
0.5731 |
| AF-I1JDS1-F1-model_v4 | 45 | 215 | 93 | 248 | 0.4874 |
0.7137 |
| AF-Q8VY52-F1-model_v4 | 31 | 215 | 39 | 232 | 0.4751 |
0.5857 |
| AF-I1JXZ1-F1-model_v4 | 23 | 214 | 67 | 241 | 0.4746 |
0.6218 |
| AF-A0A1D6J727-F1-model_v4 | 36 | 213 | 71 | 269 | 0.4634 |
0.6249 |
| AF-I1KBM7-F1-model_v4 | 24 | 214 | 70 | 251 | 0.4626 |
0.597 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1W1W1Q9 | GH26 | 37 | 215 | 50 | 207 | 0.3804 |
0.7169 |
| U5W762 | CBM13 | 1 | 215 | 63 | 524 | 0.3424 |
0.5304 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8VY52-F1-model_v4 | 31 | 215 | 39 | 232 | 0.4751 |
0.5857 |