PROTEIN: Rep_293_c_40_7
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Protein File & Metadata
Source:
Rep_293_c_40_7.pdb
Genome ID:
Protein ID:
Rep_293_c_40_7
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Protein Sequence
MRIVSLALSA LLLAAPTLHA RNVDVFTQLP AGSVSAKASS TNSGNKAADA VNGIGMTGQG 60 HVANNLGEGM WLSGKSETTV SYNARLPKGA VWFTCILDSA SAAPVAIDQI RIWNYNQNQH 120 TRRGLKKVYI HYSADGKKWL QIPAPGKDFH ILHESIGRNP EQCDYSVSFP TIHAKYVCLT 180 ADIKEGNHYD MSDPIVERET KDMNQNPAYY GISEIRFYKK CKRPVKSLPA ISAARAVFAQ 240 GYRRTTEGPR REFHIDFNSP LYTGGKIAFT LGNKQWTAVL KPDANGIYRY DGMFPAGYMT 300 EASRLSYKFT SEQGDMEASV PVPAARRWTV AFFPHSHQDI GYTHRQNDVM KLQWRNLERA 360 MQLADRTRDY PADAQYHWNT EATWSVAGYL EEFKGTEKAS RLIEAIKKGD ICVNAPLGSQ 420 LSGIMRQEEL MHLFDDAHRI ESMTGIPCKT AMMSDVPGQT WGLATAMAFN GVKYYSPGPN 480 YVPFYGKIGN DRAGALHIDW GDRPFYWTSQ SGTDKVLVWQ AGRGYSWFHG WLAGRLAVCG 540 LEPIWEYLGE LEGDRFPYDT CYLRYTVHGD NGPPDELMPD VIRKWNEEYE SPRFYIANSQ 600 EFFENFEARY GDRIPSFGGD MTPTWEDGAA STARETAMNR ESAARIARAG ILNAMYGSDC 660 PFSATRYNEA WKNTVLFSEH TWGASASGSE PFSRFTLDLW AGKKMYADSA HIQSTRLVRE 720 AVPAVDDGKY IHVANTSAWN RTDIVEMDGS FDSDRFALVD AAGNAVTTQN LSNGKWIFKA 780 DNIPALSSSV YHIVPAKKRG KAAKKLSAGV TVGNHMLDNG IVKVGIDPEL GTIKSLKYQD 840 DDFEYASGNG LNDYLYTERI ASNPQGIGAT LSAGISDNGP LAATYRIVSD APGCDSLTRD 900 VTLYAGLDRI DIVNSIEKKD IISWENVRFV FPFNFQHPDV TMDLPMSEIH PEREQLSGVN 960 KHYYSLQNGL SVGDLEHGIC LTTLDAPFVE MGSPSGEDYR LNPRHGYGWW RSSQISPVIY 1020 SWVMTNTWRT NYKASQGGKA TFRYSLLPGN PHDLCLKQHG QEREHPLTAF RSDNPVGAAQ 1080 LFRLSGNHKI ALTGITPSAD GKGYIIRLHN MDKEVAHIAI KWGALTGKAM NRCDWTETSG 1140 EQVNPDDLWM QPFEYATFKI TK 1162
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54746-F1-model_v4 | 297 | 1162 | 1 | 876 | 0.7074 |
0.8204 |
| AF-A0A132Z3E2-F1-model_v4 | 326 | 1162 | 1 | 893 | 0.6904 |
0.8377 |
| AF-Q8DN34-F1-model_v4 | 297 | 1162 | 3 | 883 | 0.6826 |
0.7963 |
| AF-P21139-F1-model_v4 | 21 | 1162 | 3 | 1035 | 0.6821 |
0.7303 |
| AF-X1WCE5-F1-model_v4 | 21 | 1162 | 4 | 1023 | 0.6811 |
0.7327 |
| AF-Q9NTJ4-F1-model_v4 | 21 | 1162 | 3 | 1035 | 0.6798 |
0.7277 |
| AF-Q91W89-F1-model_v4 | 21 | 1162 | 3 | 1034 | 0.6774 |
0.7255 |
| AF-Q54K67-F1-model_v4 | 20 | 1162 | 3 | 1086 | 0.6743 |
0.7059 |
| AF-Q54KN4-F1-model_v4 | 273 | 1162 | 11 | 993 | 0.6667 |
0.8041 |
| AF-Q9UT61-F1-model_v4 | 16 | 1162 | 6 | 1077 | 0.6665 |
0.7013 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A496D3A0 | GH38 | 42 | 1162 | 1 | 962 | 0.7938 |
0.8731 |
| AF-A0A1U7DWL7-F1-model_v4 | GH38 | 226 | 1162 | 16 | 949 | 0.7402 |
0.8343 |
| A0A0P0FHU5 | GH0 | 30 | 1162 | 40 | 1140 | 0.7383 |
0.778 |
| AF-Q7NPH5-F1-model_v4 | GH38 | 28 | 1162 | 1 | 1010 | 0.7378 |
0.7963 |
| AF-V9K9J3-F1-model_v4 | GH38 | 243 | 1162 | 1 | 788 | 0.7373 |
0.882 |
| AF-A0A0F6U8C5-F1-model_v4 | GH38 | 26 | 1162 | 12 | 1002 | 0.7324 |
0.8016 |
| AF-A0A3G9JSJ6-F1-model_v4 | GH38 | 26 | 1162 | 12 | 1002 | 0.732 |
0.801 |
| AF-B0JNP6-F1-model_v4 | GH38 | 26 | 1162 | 12 | 1002 | 0.7319 |
0.8011 |
| AF-A0A857D9D3-F1-model_v4 | GH38 | 27 | 1162 | 12 | 1002 | 0.7318 |
0.8004 |
| AF-A0A0T7BWX2-F1-model_v4 | GH38 | 17 | 1162 | 1 | 1042 | 0.7297 |
0.777 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A496D3A0 | GH38 | 42 | 1162 | 1 | 962 | 0.7938 |
0.8731 |
| A0A223HIJ3 | GH38 | 226 | 1162 | 17 | 953 | 0.7427 |
0.8346 |
| A0A1U7DWL7 | GH38 | 226 | 1162 | 16 | 949 | 0.7402 |
0.8343 |
| K9SUW2 | GH38 | 25 | 1162 | 13 | 994 | 0.7393 |
0.8148 |
| A0A5C2M3P7 | GH38 | 26 | 1162 | 16 | 1018 | 0.7324 |
0.799 |
| A0A3G9JSJ6 | GH38 | 26 | 1162 | 12 | 1002 | 0.732 |
0.801 |
| A0A6I6JYB8 | GH38 | 226 | 1162 | 13 | 845 | 0.7316 |
0.8625 |
| A0A223HII3 | GH38 | 44 | 1162 | 1 | 906 | 0.7297 |
0.8243 |
| A0A7G9Z240 | GH38 | 299 | 1162 | 3 | 840 | 0.7296 |
0.8538 |
| USR92036.1 | GH38 | 56 | 1162 | 13 | 1013 | 0.7292 |
0.8007 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5kbp-assembly1.cif.gz_B | 327 | 1161 | 1 | 884 | 0.6978 |
0.8413 |
| 5kbp-assembly1.cif.gz_A | 327 | 1161 | 1 | 886 | 0.6962 |
0.8405 |
| 2wyi-assembly1.cif.gz_A | 248 | 1162 | 1 | 895 | 0.6897 |
0.7844 |
| 2wyi-assembly1.cif.gz_B | 327 | 1162 | 1 | 895 | 0.6891 |
0.8353 |
| 2wyh-assembly1.cif.gz_A | 245 | 1162 | 1 | 904 | 0.6884 |
0.7796 |
| 2wyh-assembly1.cif.gz_B | 327 | 1162 | 1 | 890 | 0.6882 |
0.8319 |
| 3lvt-assembly1.cif.gz_A | 297 | 1161 | 1 | 833 | 0.6838 |
0.8006 |
| 6rrn-assembly1.cif.gz_A | 159 | 1162 | 31 | 988 | 0.6566 |
0.7374 |
| 6rrx-assembly1.cif.gz_A | 159 | 1162 | 31 | 993 | 0.6561 |
0.7349 |
| 6rs0-assembly1.cif.gz_A | 159 | 1162 | 31 | 997 | 0.6555 |
0.7328 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54746-F1-model_v4 | 297 | 1162 | 1 | 876 | 0.7074 |
0.8204 |
| AF-Q9KER1-F1-model_v4 | 326 | 1161 | 1 | 896 | 0.6936 |
0.841 |
| AF-P21139-F1-model_v4 | 21 | 1162 | 3 | 1035 | 0.6821 |
0.7303 |
| AF-Q9NTJ4-F1-model_v4 | 21 | 1162 | 3 | 1035 | 0.6798 |
0.7277 |
| AF-Q91W89-F1-model_v4 | 21 | 1162 | 3 | 1034 | 0.6774 |
0.7255 |
| AF-Q54K67-F1-model_v4 | 20 | 1162 | 3 | 1086 | 0.6743 |
0.7059 |
| AF-Q54KN4-F1-model_v4 | 273 | 1162 | 11 | 993 | 0.6667 |
0.8041 |
| AF-Q9UT61-F1-model_v4 | 16 | 1162 | 6 | 1077 | 0.6665 |
0.7013 |
| AF-Q54YF7-F1-model_v4 | 25 | 1162 | 1 | 1031 | 0.658 |
0.7061 |
| AF-Q28949-F1-model_v4 | 271 | 1162 | 13 | 992 | 0.6569 |
0.7909 |