dbCAN Logo

PROTEIN: Rep_2926_c_17_41

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_2926_c_17_41.pdb
Genome ID:
Rep_2926
Protein ID:
Rep_2926_c_17_41

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MVHDYYHIPA   EELGRGARVP   LTVLGDSGEV   FYELALEMVN   TIREHNERGE   RTVFICPVGP 60
VGQYPIFVRL   VNEERLSLKN   CWFINMDEYL   TDDDEWIDAS   DPLSFRGFME   RTVYSKIDPA 120
LVVPEDQRVF   PDPNDLDRIP   ALIEELGGVD   IAFGGIGITG   HLAFNEPDPS   LTPEEFAQLK 180
TRTLDIHAET   RATNCIGDLG   GALEDMPHRC   VTIGMSEILG   ARKVRLGVFR   DWHRAVIRRT 240
AYGEVSSDFP   ATLLQNHPDA   RVYVNANAAQ   AAC 273
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2G0K8-F1-model_v4 19 272 1 242 0.839 0.9202
AF-Q04802-F1-model_v4 19 271 1 244 0.836 0.9042
AF-Q9XVJ2-F1-model_v4 19 272 1 246 0.8336 0.9254
AF-A0A132YZ81-F1-model_v4 19 272 1 233 0.8304 0.9099
AF-Q8ZQX7-F1-model_v4 19 272 1 247 0.8271 0.9138
AF-Q32IQ2-F1-model_v4 19 272 1 247 0.8271 0.9138
AF-A0A0H3GK04-F1-model_v4 19 272 1 247 0.8269 0.9135
AF-A0A077ZK28-F1-model_v4 19 272 1 247 0.8245 0.9113
AF-Q54XK9-F1-model_v4 19 272 1 250 0.8244 0.9018
AF-A0A0K0DTD1-F1-model_v4 19 272 1 247 0.8244 0.9125
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H4PAS9-F1-model_v4 CE9 19 273 1 246 0.574 0.8895
AF-G0IWQ0-F1-model_v4 CE9 19 273 1 245 0.574 0.892
AF-A0A1W2H3T6-F1-model_v4 CE9 19 272 1 243 0.5696 0.8922
AF-J9UUU6-F1-model_v4 CE9 19 272 1 239 0.5626 0.9081
AF-D8I9Y7-F1-model_v4 CE9 19 272 1 239 0.5589 0.9019
AF-K0JLB5-F1-model_v4 CE9 19 272 1 239 0.5586 0.9014
AF-D5U6N5-F1-model_v4 CE9 19 272 1 239 0.5583 0.901
AF-G0ELA3-F1-model_v4 CE9 19 272 1 239 0.5582 0.9007
AF-A0A3B6VIU1-F1-model_v4 CE9 19 272 1 239 0.5581 0.9005
AF-A0A3B6VCF9-F1-model_v4 CE9 19 272 1 239 0.558 0.9005
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 19 259 1 280 0.6103 0.7444
A0A0H4PAS9 CE9 19 273 1 246 0.574 0.8895
A0A3B6VIU1 CE9 19 272 1 239 0.5581 0.9005
U5ECU6 CE9 18 272 391 631 0.547 0.8732
A0A871RFD9 GH3 1 273 970 1250 0.5076 0.8401
A0A875S4F4 GH3 11 273 833 1287 0.5014 0.865
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 19 272 1 241 0.8516 0.918
5hj5-assembly2.cif.gz_B 19 273 1 248 0.827 0.9118
7lqm-assembly2.cif.gz_D 19 272 1 247 0.8137 0.9022
7lqn-assembly2.cif.gz_I 18 272 1 248 0.8132 0.89
7lqm-assembly1.cif.gz_A 19 272 1 243 0.8105 0.8982
1ne7-assembly1.cif.gz_E 19 272 1 247 0.8093 0.9077
7lqm-assembly1.cif.gz_B 19 272 1 245 0.8074 0.8991
1cd5-assembly1.cif.gz_A 19 272 1 247 0.8072 0.8945
7lqm-assembly2.cif.gz_C 19 272 1 237 0.8001 0.9054
3hn6-assembly1.cif.gz_D 18 272 3 250 0.7996 0.8893
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q97MK9-F1-model_v4 19 272 1 241 0.8619 0.9274
AF-Q4L9T8-F1-model_v4 19 272 1 242 0.8614 0.9254
AF-Q8CTR3-F1-model_v4 19 272 1 242 0.8596 0.9251
AF-A0PYW1-F1-model_v4 19 272 1 241 0.8559 0.9218
AF-Q49VB6-F1-model_v4 19 272 1 242 0.8558 0.9201
AF-C3L2N7-F1-model_v4 19 272 1 241 0.8555 0.9263
AF-C1FV12-F1-model_v4 19 272 1 241 0.8552 0.9261
AF-B1IKY4-F1-model_v4 19 272 1 241 0.8551 0.926
AF-B1KZ07-F1-model_v4 19 272 1 241 0.8547 0.9256
AF-A7FX73-F1-model_v4 19 272 1 241 0.8546 0.9255
Download Full SwissProt Results