PROTEIN: Rep_275_c_3_39
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Protein File & Metadata
Source:
Rep_275_c_3_39.pdb
Genome ID:
Protein ID:
Rep_275_c_3_39
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Protein Sequence
MNNLSKHLTM WQRFWRSKGF GVHSPFAFYF ITNVMRQKYH YYAYESIEYL HTAIKQAIKH 60 TGKRKRPMSL HNAKLLFRIV NYFNPLNVLQ IGSNYGLSAA TTLMVNSKSH LWLFDPASLT 120 CDATSGIFTQ FESRITHLNS IVNAVTDYPA ALADDDHPFI VINSISHVDN YSQLQYFVNS 180 ILDSEGVVIF RNIANDRLMR QMWEDSRQYA QHGMSFSNDR LAVFVARQSL PRQDFSIWI 239
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5K4F4E6-F1-model_v4 | 5 | 227 | 3 | 231 | 0.6462 |
0.7058 |
| AF-A0A2K6VZM4-F1-model_v4 | 1 | 227 | 1 | 233 | 0.6378 |
0.6906 |
| AF-I1KPT4-F1-model_v4 | 10 | 228 | 9 | 230 | 0.6378 |
0.7041 |
| AF-I1KPT3-F1-model_v4 | 38 | 228 | 23 | 233 | 0.6346 |
0.7967 |
| AF-A0A183XRS5-F1-model_v4 | 3 | 227 | 9 | 238 | 0.633 |
0.6955 |
| AF-Q55AS5-F1-model_v4 | 6 | 228 | 13 | 251 | 0.6281 |
0.7125 |
| AF-C6T2E2-F1-model_v4 | 38 | 228 | 23 | 236 | 0.6272 |
0.7929 |
| AF-C6SVC4-F1-model_v4 | 3 | 228 | 8 | 246 | 0.6174 |
0.6826 |
| AF-A0A5K4F6Z2-F1-model_v4 | 3 | 227 | 28 | 250 | 0.6172 |
0.6965 |
| AF-I1K629-F1-model_v4 | 10 | 228 | 28 | 250 | 0.6138 |
0.7023 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8c9v-assembly1.cif.gz_A-2 | 46 | 229 | 1 | 184 | 0.6658 |
0.783 |
| 3tr6-assembly1.cif.gz_A-2 | 7 | 228 | 1 | 222 | 0.6605 |
0.7122 |
| 8gxo-assembly1.cif.gz_B | 10 | 228 | 5 | 211 | 0.6585 |
0.7364 |
| 5x7f-assembly1.cif.gz_A-2 | 10 | 227 | 1 | 198 | 0.6523 |
0.7381 |
| 5log-assembly1.cif.gz_B | 7 | 228 | 1 | 218 | 0.6512 |
0.7069 |
| 5lhm-assembly1.cif.gz_A | 36 | 229 | 9 | 213 | 0.6457 |
0.7682 |
| 3c3y-assembly1.cif.gz_B | 39 | 228 | 15 | 225 | 0.6434 |
0.7984 |
| 6g80-assembly1.cif.gz_A | 42 | 229 | 1 | 202 | 0.6339 |
0.7738 |
| 5kva-assembly1.cif.gz_A | 10 | 228 | 5 | 227 | 0.6338 |
0.6977 |
| 3tfw-assembly1.cif.gz_B-2 | 39 | 228 | 16 | 220 | 0.6334 |
0.7802 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A077EW86-F1-model_v4 | 39 | 228 | 28 | 239 | 0.629 |
0.8017 |
| AF-A0A077EWA5-F1-model_v4 | 40 | 228 | 29 | 239 | 0.6271 |
0.803 |
| AF-O24150-F1-model_v4 | 10 | 228 | 19 | 242 | 0.6211 |
0.7023 |
| AF-Q9ZTT5-F1-model_v4 | 10 | 228 | 36 | 259 | 0.6053 |
0.7038 |
| AF-P96188-F1-model_v4 | 45 | 239 | 53 | 296 | 0.4592 |
0.7635 |