PROTEIN: Rep_265_c_144_12
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Protein File & Metadata
Source:
Rep_265_c_144_12.pdb
Genome ID:
Protein ID:
Rep_265_c_144_12
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Detailed structural information will appear here after analysis...
Protein Sequence
MSENKKGEWG GKFSMPMFKA WVPDAIRPWL YVYLIFTFQL SGGVYIGSLN EMMGSMSLMR 60 EDILMCLYAS LCGLAFTFPI LFRTKFRFTN RTLLLFSATG IVLCNIAGMY VTNLPLLWFV 120 CFISGCLKIQ GTFECISNIQ LWMAPGRDFR IFFPLLHLWI MLSICVSDLL AVYFCYVSTW 180 HYMPLFMAGV MMFNVLWLFV CLKHFRFMKL PFYAIDWLGG ILWVLAVMQV VYICCYGEFY 240 DWWQSPVIRM LTLTSVLTLI LAIVRMRLIR HPWIEPKMWC NKYLPGLLFL AFVIEGFMAT 300 EHVLEEVFYE SGMEWHNHTS SILNWPTMGG IVCACFFALL WLRVWMFGRV RLIAIGLAVF 360 VAYAVCFYFT VSTDMTIQQL YLPMFLRGFA ATLLSIVMLY SIQSVTNFMV FFQSLAIFQS 420 IHLLIGGVTG AALYAYGIRY LVSDSIARYG SYLDSISMPA HAVPYHIGEL MAQFQVAAVK 480 QIYGIVIYAA IIMLMAVLMY DSPFRREHNL WMPSWTVVGK MLKKRLSSDK 530
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSP9-F1-model_v4 | 7 | 518 | 15 | 547 | 0.8196 |
0.8769 |
| AF-G3XD81-F1-model_v4 | 8 | 506 | 1 | 497 | 0.8184 |
0.8703 |
| AF-Q32DH7-F1-model_v4 | 11 | 506 | 6 | 504 | 0.8154 |
0.8691 |
| AF-Q5F680-F1-model_v4 | 9 | 506 | 1 | 498 | 0.8103 |
0.8563 |
| AF-P0AEJ0-F1-model_v4 | 11 | 503 | 3 | 500 | 0.8036 |
0.8644 |
| AF-P44927-F1-model_v4 | 14 | 503 | 7 | 504 | 0.8013 |
0.8658 |
| AF-P52600-F1-model_v4 | 14 | 503 | 7 | 504 | 0.8006 |
0.8667 |
| AF-Q9I4A2-F1-model_v4 | 3 | 510 | 1 | 503 | 0.7946 |
0.832 |
| AF-Q9I482-F1-model_v4 | 11 | 512 | 4 | 474 | 0.7932 |
0.861 |
| AF-A0A0H3GNL5-F1-model_v4 | 9 | 506 | 9 | 516 | 0.7906 |
0.8473 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 9 | 528 | 9 | 549 | 0.7374 |
0.788 |
| ARF89445.1 | GT1 | 1 | 511 | 131 | 958 | 0.6474 |
0.8665 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 11 | 506 | 18 | 463 | 0.6363 |
0.7394 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 12 | 530 | 31 | 564 | 0.5931 |
0.7845 |
| A0A918L8E6 | GT2 | 13 | 530 | 1 | 613 | 0.5579 |
0.649 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 2 | 502 | 2 | 456 | 0.5458 |
0.7532 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 530 | 125 | 776 | 0.5438 |
0.6558 |
| AF-W8VNY0-F1-model_v4 | GH17 | 5 | 502 | 1 | 450 | 0.5384 |
0.7491 |
| AF-A0A1Y0M8J3-F1-model_v4 | GH17 | 5 | 502 | 3 | 452 | 0.5373 |
0.7492 |
| AF-A0A024FEX3-F1-model_v4 | GH17 | 5 | 502 | 5 | 454 | 0.5371 |
0.7483 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 9 | 528 | 9 | 549 | 0.7374 |
0.788 |
| ARF89445.1 | GT1 | 1 | 511 | 131 | 958 | 0.6474 |
0.8665 |
| A0A387HHJ8 | GT1 | 12 | 530 | 31 | 564 | 0.5931 |
0.7845 |
| A0A918L8E6 | GT2 | 13 | 530 | 1 | 613 | 0.5579 |
0.649 |
| A0A3C1RID2 | GH17 | 3 | 530 | 3 | 578 | 0.5511 |
0.6675 |
| A0A7H8RF34 | CBM24 | 1 | 530 | 125 | 776 | 0.5438 |
0.6558 |
| A0A9Q9RZ67 | GH78 | 9 | 529 | 741 | 1465 | 0.5273 |
0.7912 |
| A0A7H8QT70 | GH27 | 1 | 530 | 50 | 741 | 0.5152 |
0.6834 |
| F9G000 | GH3 | 6 | 503 | 49 | 548 | 0.507 |
0.7881 |
| A0A8S2B775 | GT5 | 1 | 506 | 392 | 905 | 0.5038 |
0.6742 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 12 | 506 | 1 | 483 | 0.7632 |
0.8165 |
| 8pnl-assembly2.cif.gz_C | 12 | 506 | 1 | 486 | 0.7536 |
0.8048 |
| 7y58-assembly1.cif.gz_A | 15 | 506 | 1 | 504 | 0.7512 |
0.811 |
| 7d5p-assembly2.cif.gz_B | 27 | 506 | 1 | 413 | 0.7178 |
0.8221 |
| 7d5p-assembly1.cif.gz_A | 25 | 506 | 1 | 408 | 0.7168 |
0.825 |
| 7d5q-assembly2.cif.gz_B | 27 | 506 | 1 | 411 | 0.7138 |
0.8194 |
| 7d5q-assembly1.cif.gz_A | 27 | 506 | 1 | 403 | 0.7098 |
0.821 |
| 7bp3-assembly1.cif.gz_B | 23 | 526 | 1 | 394 | 0.7079 |
0.8265 |
| 6kkl-assembly1.cif.gz_A | 22 | 507 | 1 | 370 | 0.7062 |
0.8467 |
| 6kkj-assembly1.cif.gz_B | 24 | 506 | 1 | 357 | 0.698 |
0.8464 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0DPR7-F1-model_v4 | 2 | 506 | 1 | 509 | 0.8176 |
0.8579 |
| AF-Q9RQ29-F1-model_v4 | 9 | 506 | 1 | 498 | 0.8157 |
0.8623 |
| AF-P0AEJ1-F1-model_v4 | 11 | 503 | 3 | 500 | 0.8048 |
0.8655 |
| AF-P0AEJ0-F1-model_v4 | 11 | 503 | 3 | 500 | 0.8036 |
0.8644 |
| AF-P44927-F1-model_v4 | 14 | 503 | 7 | 504 | 0.8013 |
0.8658 |
| AF-P52600-F1-model_v4 | 14 | 503 | 7 | 504 | 0.8006 |
0.8667 |
| AF-P32369-F1-model_v4 | 7 | 510 | 2 | 476 | 0.7886 |
0.85 |
| AF-Q8Y9K8-F1-model_v4 | 7 | 502 | 1 | 468 | 0.7775 |
0.8453 |
| AF-Q92EE1-F1-model_v4 | 7 | 502 | 1 | 468 | 0.7772 |
0.8444 |
| AF-P23054-F1-model_v4 | 11 | 510 | 4 | 458 | 0.7766 |
0.8549 |