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PROTEIN: Rep_2603_c_6_85

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Protein File & Metadata
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Source:
Rep_2603_c_6_85.pdb
Genome ID:
Rep_2603
Protein ID:
Rep_2603_c_6_85

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKIEGKGNDG   YVNRPARGIV   NVPAALRDRA   ERNVRRRRTV   NLLVGLLVPA   IVLTVFLSVI 60
CDARSLGTDS   VGNTDGVYGV   VLSDIEGLTE   ANPRIVDIAM   LGAYDANTFS   LATDNGVDHI 120
AADGILGKIF   PVSAGLQYRF   AVTQAVSPYT   LLMQGARFLQ   FKFSLENGVW   RAAHNVLGRE 180
LEKDVLDVLH   FLDEHPGEVV   LLLFQCTNEE   ENNADCPLFD   EWLAGVEYKG   KNLYDYAEIY 240
VGDDALADDG   SLSETRTDIT   DLTYNDVTDG   GKQAGIVLLQ   RYAELYGKNE   YTRYFYDMDA 300
NALHRWHSRI   GCSVLIDEID   DYATDLAEMR   AYRFGLRVNQ   TQAAFSGATF   GDILRDIGEW 360
SLLKFASKYN   VELLENENFS   DWLKAMPIFQ   VDFANSDYGD   FNNRVNGAIR   ARNEEIVRIL 420
LGEGATVADL   YE 432
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0J9XQQ7-F1-model_v4 72 429 5 321 0.7482 0.8806
AF-Q8BLJ3-F1-model_v4 72 425 6 321 0.7316 0.8639
AF-E9QDS6-F1-model_v4 82 425 1 306 0.7308 0.8673
AF-Q567I4-F1-model_v4 75 430 4 309 0.7287 0.8685
AF-Q58EK3-F1-model_v4 73 424 7 322 0.7286 0.8621
AF-D4A1H2-F1-model_v4 73 424 7 321 0.7274 0.8617
AF-Q9VIP3-F1-model_v4 76 426 1 316 0.7271 0.8683
AF-G4VGP6-F1-model_v4 77 423 3 325 0.7262 0.8473
AF-A0A0N4UJM2-F1-model_v4 78 414 1 317 0.7245 0.8473
AF-A0A2K6WKJ8-F1-model_v4 78 414 1 317 0.724 0.8466
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1S6HN06-F1-model_v4 CBM13 67 432 24 388 0.5403 0.6753
AF-A0A1U9YPT4-F1-model_v4 CBM13 71 422 10 329 0.532 0.7391
AF-A0A0U2MWD1-F1-model_v4 CBM13 68 429 29 459 0.5318 0.6813
AF-A0A2L1TVS7-F1-model_v4 CBM13 71 422 10 329 0.5313 0.7371
QPW51669.1 CBM13 69 432 46 420 0.5295 0.6813
AF-R4YM40-F1-model_v4 CBM13 19 423 1 388 0.5277 0.6255
AF-A0A1V0UZE7-F1-model_v4 CBM13 82 422 1 309 0.5251 0.7391
A0A2C9Z473 CBM13 68 425 36 403 0.5177 0.6674
AF-I2N2U7-F1-model_v4 CBM13 74 432 41 405 0.5121 0.6335
AF-A0A1C5I0K5-F1-model_v4 CE3 69 429 29 616 0.4455 0.7191
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UHQ24446.1 CBM13 73 431 3 419 0.547 0.689
A0A9J7AAC7 CBM13 68 432 28 427 0.5439 0.6745
BCT91095.1 CBM13 68 432 34 479 0.5423 0.6784
AFU17324.1 CBM13 62 417 1 366 0.54 0.7102
A0A0U2MWD1 CBM13 68 429 29 459 0.5318 0.6813
QTL94381.1 CBM13 68 425 24 419 0.5301 0.6733
QPW51669.1 CBM13 69 432 46 420 0.5295 0.6813
A0A2C9Z473 CBM13 68 425 36 403 0.5177 0.6674
I2N2U7 CBM13 74 432 41 405 0.5121 0.6335
A0A1H9T7I3 CBM13 87 416 141 412 0.4589 0.7842
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2plc-assembly1.cif.gz_A 77 414 2 274 0.697 0.867
4rv3-assembly1.cif.gz_A 76 417 5 301 0.6626 0.802
4i9t-assembly1.cif.gz_A 76 421 6 305 0.6616 0.7991
6s2a-assembly3.cif.gz_C 77 417 9 296 0.6614 0.8165
4s3g-assembly1.cif.gz_A 76 414 5 300 0.6607 0.8007
7ptd-assembly1.cif.gz_A 76 417 8 296 0.6599 0.8119
4ptd-assembly1.cif.gz_A 76 417 8 296 0.6599 0.8117
2ptd-assembly1.cif.gz_A 77 417 9 296 0.6599 0.8141
6ptd-assembly1.cif.gz_A 76 417 8 296 0.6598 0.8119
3ptd-assembly1.cif.gz_A 76 417 8 296 0.6598 0.8115
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8BLJ3-F1-model_v4 72 425 6 321 0.7316 0.8639
AF-Q567I4-F1-model_v4 75 430 4 309 0.7287 0.8685
AF-Q58EK3-F1-model_v4 73 424 7 322 0.7286 0.8621
AF-A6QNU9-F1-model_v4 72 425 6 321 0.7255 0.8571
AF-Q63HM9-F1-model_v4 76 423 10 321 0.7196 0.8601
AF-B2RXA1-F1-model_v4 73 425 14 340 0.7172 0.8443
AF-O15886-F1-model_v4 76 427 13 374 0.7058 0.82
AF-P09194-F1-model_v4 76 432 7 358 0.703 0.7927
AF-Q0VAA5-F1-model_v4 68 360 5 281 0.6247 0.8111
AF-Q55DH0-F1-model_v4 63 418 77 574 0.5683 0.7864
Download Full SwissProt Results