PROTEIN: Rep_253_c_89_2
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Protein File & Metadata
Source:
Rep_253_c_89_2.pdb
Genome ID:
Protein ID:
Rep_253_c_89_2
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Protein Sequence
MKNQLLFSGR LATLLFLVNA GISVMASEPL KDIKRNAKAL SQQKKDSTEQ SSDRGIMLNA 60 KSTTEPRQVE IGLPMTYTAV MFNGLPAVYY YWPNTTSNHW RSEQLLTRQS MLDMPHVAIT 120 EGEIGYGVDS WAEIGGNQFQ GRVKYGINTF GAQNVDLNLS GPLGKGWTYT ASAYNNFDPG 180 SFNVKFAQFI DRSQFYTGGL TKHWDNGTQL TFMYKYTNVH NLTNLANYAP FRWHSDGSVS 240 TINGFKIGRD SYLPVDGQME YIDARTGERK TMSLYDGTKA QTHEGSVFFD TPLSNGWNLS 300 LRGKLSHSAG ASGDQIATGV LNTANGITAT YTDGRAYTGL VQGRTAQINN FQVNDALFTA 360 QMRAKKGYHD WTLGIDELHT DIHYVRSTTA YYHEVAANPH KLFINGATSA YSKFNNGSEF 420 DDGNENKLAA YIFDKWEPTD RFRLNYGARL EWFHASVDNI ENPRTAWSNA TGEHYFYLGG 480 TDANGKTIAL TNHKVNSLNY AFTLAPKWNI TNEFGLTAEG NFLKQHRHLE AYSGTSVPLF 540 SARNMFVGQA GIFYNSSWVN LVSAFTYATQ NHNYNRLYVT NPNDATQTEM VANTYSIKTM 600 GWTTDAVFHP FQGFQFHTRV TLQSPKYGGY SFNTSWKDYS FKDMIVTKTS KFLLELDPRY 660 SVGPFAVWAN FRYYSKQYVN VGNSVFFKGR WETFGGMSYV VNKNLTLTAN VTNFLGQSGA 720 QGTIPSSDTV EDASGFDGTV LAGNYILPFQ VMFSAQIKF 759
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0CL48-F1-model_v4 | 29 | 759 | 1 | 702 | 0.7526 |
0.7925 |
| AF-Q9HWM5-F1-model_v4 | 1 | 759 | 3 | 694 | 0.7478 |
0.7952 |
| AF-P75780-F1-model_v4 | 2 | 759 | 10 | 760 | 0.7425 |
0.7651 |
| AF-A0A0H3GUM0-F1-model_v4 | 27 | 759 | 27 | 706 | 0.7407 |
0.807 |
| AF-A0A0H3H0D6-F1-model_v4 | 29 | 759 | 18 | 672 | 0.7398 |
0.815 |
| AF-Q0P814-F1-model_v4 | 31 | 759 | 24 | 709 | 0.7376 |
0.7989 |
| AF-Q9HUX3-F1-model_v4 | 26 | 759 | 27 | 708 | 0.7335 |
0.7977 |
| AF-A0A0H3GNH3-F1-model_v4 | 24 | 759 | 14 | 709 | 0.7327 |
0.7825 |
| AF-Q9I683-F1-model_v4 | 35 | 759 | 35 | 730 | 0.7312 |
0.7919 |
| AF-Q9HZT6-F1-model_v4 | 35 | 759 | 36 | 718 | 0.7293 |
0.7972 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2U8E3N6 | PL0 | 4 | 755 | 1988 | 3664 | 0.3507 |
0.5857 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a60-assembly1.cif.gz_A | 32 | 759 | 1 | 677 | 0.7603 |
0.8149 |
| 6z8a-assembly1.cif.gz_A | 38 | 759 | 9 | 677 | 0.7544 |
0.8171 |
| 4epa-assembly1.cif.gz_A | 42 | 759 | 13 | 631 | 0.744 |
0.8372 |
| 8b14-assembly1.cif.gz_A | 38 | 759 | 7 | 696 | 0.7391 |
0.7888 |
| 4cu4-assembly1.cif.gz_A | 38 | 759 | 5 | 693 | 0.7383 |
0.7879 |
| 5fp1-assembly1.cif.gz_A | 36 | 759 | 1 | 701 | 0.7359 |
0.7767 |
| 6bpo-assembly4.cif.gz_D | 40 | 759 | 1 | 711 | 0.7327 |
0.7693 |
| 6i97-assembly1.cif.gz_B | 22 | 759 | 10 | 759 | 0.7323 |
0.7635 |
| 6i97-assembly1.cif.gz_A | 21 | 759 | 9 | 763 | 0.7314 |
0.7637 |
| 2fcp-assembly1.cif.gz_A | 38 | 759 | 6 | 705 | 0.7313 |
0.7751 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-E1W8M5-F1-model_v4 | 23 | 759 | 1 | 702 | 0.7543 |
0.7943 |
| AF-P0CL48-F1-model_v4 | 29 | 759 | 1 | 702 | 0.7526 |
0.7925 |
| AF-P75780-F1-model_v4 | 2 | 759 | 10 | 760 | 0.7425 |
0.7651 |
| AF-P46359-F1-model_v4 | 29 | 759 | 14 | 672 | 0.7406 |
0.8112 |
| AF-Q47162-F1-model_v4 | 1 | 759 | 8 | 735 | 0.7377 |
0.7694 |
| AF-Q01674-F1-model_v4 | 32 | 759 | 31 | 710 | 0.7365 |
0.8043 |
| AF-A1JTG3-F1-model_v4 | 23 | 759 | 16 | 672 | 0.7361 |
0.8088 |
| AF-P0C2M9-F1-model_v4 | 25 | 759 | 17 | 672 | 0.736 |
0.8099 |
| AF-Q8CW90-F1-model_v4 | 4 | 759 | 10 | 760 | 0.7341 |
0.7564 |
| AF-A0A0H2ZI93-F1-model_v4 | 27 | 759 | 28 | 708 | 0.7338 |
0.7991 |