PROTEIN: Rep_253_c_40_5
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_253_c_40_5.pdb
Genome ID:
Protein ID:
Rep_253_c_40_5
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MTIRKNCYYR MLERPSMDWR RLMNYTVIRF MCVLRKNGIQ TEDENSCVII DDTTLQKSGK 60 FIEHITKIFD HVKRNYVLGY KLLLCAFGGI GKKQFRRRFS LHREKDNPDY QRELECGMSK 120 LDCTVEMVKR MWKCGLHLRY ALADSWFACE DFISFIRKIA NGAIHYVGLA KMGATKYVIN 180 GKKHNAGELV ALYSREYTHA CRKYKCQYIA LRGDLGNLPN RIFLIKYGHN ERWNIMLSTD 240 ISMSFVRAFE LYQIRRNIEV VNRETKEYLG LGAYAGRNLN GQIADATLCY ITYTVMALEK 300 RMADYETPWA SCSLKWKTM 319
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0ER14-F1-model_v4 | 1 | 315 | 22 | 359 | 0.732 |
0.8033 |
| AF-X8F6N6-F1-model_v4 | 1 | 305 | 10 | 289 | 0.7195 |
0.8075 |
| AF-X8F6B6-F1-model_v4 | 1 | 305 | 10 | 289 | 0.7191 |
0.8071 |
| AF-A0A0H3GPI0-F1-model_v4 | 1 | 314 | 85 | 410 | 0.6531 |
0.7655 |
| AF-P0CF93-F1-model_v4 | 1 | 315 | 64 | 367 | 0.6438 |
0.7391 |
| AF-P0CF91-F1-model_v4 | 1 | 313 | 64 | 366 | 0.6438 |
0.7411 |
| AF-P0CF92-F1-model_v4 | 1 | 313 | 69 | 366 | 0.6428 |
0.7508 |
| AF-Q32GW6-F1-model_v4 | 1 | 309 | 85 | 372 | 0.634 |
0.7701 |
| AF-Q32CZ3-F1-model_v4 | 1 | 309 | 85 | 372 | 0.6162 |
0.7673 |
| AF-X8F007-F1-model_v4 | 1 | 308 | 2 | 365 | 0.599 |
0.7365 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1mm8-assembly1.cif.gz_A-2 | 1 | 318 | 49 | 390 | 0.6356 |
0.7618 |
| 1mus-assembly1.cif.gz_A-2 | 1 | 318 | 50 | 393 | 0.6351 |
0.7633 |
| 1muh-assembly1.cif.gz_A-2 | 1 | 319 | 49 | 391 | 0.6313 |
0.7547 |
| 4dm0-assembly1.cif.gz_A-2 | 1 | 318 | 51 | 395 | 0.6312 |
0.7601 |
| 3ecp-assembly1.cif.gz_A-2 | 1 | 318 | 51 | 393 | 0.6281 |
0.7559 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00461-F1-model_v4 | 1 | 307 | 29 | 354 | 0.6776 |
0.7786 |
| AF-P0CF93-F1-model_v4 | 1 | 315 | 64 | 367 | 0.6438 |
0.7391 |
| AF-P0CF91-F1-model_v4 | 1 | 313 | 64 | 366 | 0.6438 |
0.7411 |
| AF-Q45620-F1-model_v4 | 1 | 314 | 69 | 353 | 0.6437 |
0.7888 |
| AF-P0CF92-F1-model_v4 | 1 | 313 | 69 | 366 | 0.6428 |
0.7508 |
| AF-P11901-F1-model_v4 | 1 | 312 | 65 | 366 | 0.6416 |
0.7417 |
| AF-P55729-F1-model_v4 | 3 | 319 | 47 | 356 | 0.6381 |
0.7082 |
| AF-P28912-F1-model_v4 | 1 | 309 | 67 | 378 | 0.635 |
0.7242 |
| AF-P28917-F1-model_v4 | 1 | 304 | 67 | 351 | 0.6339 |
0.7782 |
| AF-P75741-F1-model_v4 | 1 | 304 | 67 | 351 | 0.6329 |
0.7771 |