PROTEIN: Rep_253_c_23_12
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Protein File & Metadata
Source:
Rep_253_c_23_12.pdb
Genome ID:
Protein ID:
Rep_253_c_23_12
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Protein Sequence
MKILLIGEYS NVHATLAEGL RQLGHSVTVV SNGDFWKNYP RDIDVSREKG RWGGYQLSLK 60 IASILPKLRN YDTVQLINPL FFELKAKHIP PLYKYLRNHN RKIVLGAFGM DYYWVHENIT 120 RLPLRYSDFN IGHRLRKDHE AAMYINDWTR TEKERANQLI AQDCDAIVAG LYEYWVAYQP 180 VYPTKTSFIP FPIKLKKVPE SYSFSYPLRL FIGINQERSV YKGTDIMLKA AQNISEKYPD 240 RAQLFIAESL PFPEYTKAMQ QSDVLLDQLY SYTPAMNALE AMSRGIIVIG GGEPENYDIL 300 NEHELRPIIN VEPNYDSVYT QLERLILNPD LIPALKQQSV EYIRRHHDYI KVAKRYEQLY 360 NAIH 364
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F0S0-F1-model_v4 | 1 | 364 | 4 | 349 | 0.7558 |
0.7991 |
| AF-A0A0H3GSJ8-F1-model_v4 | 1 | 364 | 4 | 352 | 0.7391 |
0.7794 |
| AF-Q59002-F1-model_v4 | 1 | 364 | 1 | 386 | 0.7144 |
0.7562 |
| AF-A4SH27-F1-model_v4 | 1 | 363 | 1 | 376 | 0.7112 |
0.7481 |
| AF-O05083-F1-model_v4 | 1 | 360 | 2 | 353 | 0.7092 |
0.7447 |
| AF-Q0P9C5-F1-model_v4 | 1 | 364 | 2 | 359 | 0.7069 |
0.7374 |
| AF-Q2G255-F1-model_v4 | 1 | 364 | 1 | 373 | 0.7065 |
0.741 |
| AF-K0EX89-F1-model_v4 | 1 | 364 | 1 | 366 | 0.7052 |
0.7306 |
| AF-P9WMZ1-F1-model_v4 | 1 | 364 | 1 | 387 | 0.704 |
0.7443 |
| AF-P9WMY9-F1-model_v4 | 1 | 364 | 1 | 394 | 0.7024 |
0.7639 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8F9RKQ6 | GT4 | 1 | 364 | 1 | 364 | 0.9313 |
0.9424 |
| AF-A0A3A9XA44-F1-model_v4 | GT0 | 1 | 364 | 1 | 381 | 0.9106 |
0.9422 |
| AF-A0A7L4ZIJ9-F1-model_v4 | GT0 | 1 | 364 | 1 | 380 | 0.9094 |
0.9437 |
| AF-A0A2S1Q8F1-F1-model_v4 | GT0 | 1 | 362 | 1 | 377 | 0.9089 |
0.9404 |
| AF-A0A3A9W8C7-F1-model_v4 | GT0 | 1 | 364 | 1 | 381 | 0.9086 |
0.9403 |
| WDG00261.1 | GT0 | 1 | 363 | 1 | 356 | 0.908 |
0.9314 |
| AF-A0A6G7RRB4-F1-model_v4 | GT0 | 1 | 363 | 1 | 381 | 0.9071 |
0.9415 |
| AF-A0A7H8W5G7-F1-model_v4 | GT0 | 1 | 363 | 1 | 378 | 0.9061 |
0.937 |
| AF-A0A345H6Z6-F1-model_v4 | GT0 | 1 | 364 | 1 | 380 | 0.9059 |
0.9426 |
| AF-A0A7U2NHS6-F1-model_v4 | GT0 | 1 | 363 | 1 | 378 | 0.9058 |
0.9368 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8F9RKQ6 | GT4 | 1 | 364 | 1 | 364 | 0.9313 |
0.9424 |
| BCN22213.1 | GT4 | 1 | 363 | 1 | 355 | 0.9039 |
0.929 |
| A0A6A1RNH8 | GT4 | 1 | 364 | 1 | 381 | 0.8829 |
0.9173 |
| QOT08100.1 | GT4 | 1 | 363 | 1 | 337 | 0.8463 |
0.8966 |
| ASG66426.1 | GT4 | 1 | 364 | 1 | 346 | 0.844 |
0.8826 |
| A0A0U2W3G6 | GT4 | 1 | 364 | 1 | 330 | 0.8429 |
0.9019 |
| A0A930BJB7 | GT4 | 1 | 364 | 1 | 338 | 0.8399 |
0.905 |
| L8A186 | GT4 | 1 | 364 | 3 | 350 | 0.8362 |
0.8749 |
| A0A7T5EX02 | GT4 | 3 | 364 | 1 | 327 | 0.8353 |
0.8971 |
| A0A0U2MI87 | GT4 | 1 | 363 | 1 | 331 | 0.8338 |
0.8907 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2jjm-assembly1.cif.gz_B | 1 | 364 | 2 | 359 | 0.7162 |
0.7442 |
| 3mbo-assembly1.cif.gz_A | 1 | 364 | 3 | 371 | 0.7149 |
0.742 |
| 6n1x-assembly1.cif.gz_A | 1 | 364 | 5 | 377 | 0.7146 |
0.747 |
| 3mbo-assembly4.cif.gz_H | 1 | 364 | 2 | 368 | 0.7146 |
0.7387 |
| 3mbo-assembly3.cif.gz_E | 1 | 364 | 2 | 375 | 0.7143 |
0.7439 |
| 3mbo-assembly1.cif.gz_B | 1 | 364 | 2 | 368 | 0.7139 |
0.7386 |
| 3mbo-assembly2.cif.gz_C | 1 | 364 | 2 | 373 | 0.7137 |
0.7422 |
| 3mbo-assembly3.cif.gz_F | 1 | 364 | 2 | 367 | 0.713 |
0.7381 |
| 3mbo-assembly4.cif.gz_G | 1 | 364 | 2 | 363 | 0.7101 |
0.7352 |
| 6ejj-assembly1.cif.gz_A | 1 | 364 | 3 | 359 | 0.7024 |
0.7364 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54490-F1-model_v4 | 1 | 364 | 1 | 355 | 0.7236 |
0.7549 |
| AF-Q48453-F1-model_v4 | 1 | 363 | 1 | 358 | 0.7234 |
0.7541 |
| AF-Q59002-F1-model_v4 | 1 | 364 | 1 | 386 | 0.7144 |
0.7562 |
| AF-O05083-F1-model_v4 | 1 | 360 | 2 | 353 | 0.7092 |
0.7447 |
| AF-Q81ST7-F1-model_v4 | 1 | 364 | 3 | 375 | 0.7083 |
0.7449 |
| AF-Q0P9C5-F1-model_v4 | 1 | 364 | 2 | 359 | 0.7069 |
0.7374 |
| AF-B8HCF8-F1-model_v4 | 1 | 364 | 4 | 408 | 0.706 |
0.772 |
| AF-P42982-F1-model_v4 | 1 | 364 | 4 | 377 | 0.7056 |
0.7384 |
| AF-A1R8N8-F1-model_v4 | 3 | 364 | 1 | 402 | 0.7041 |
0.7653 |
| AF-P9WMZ1-F1-model_v4 | 1 | 364 | 1 | 387 | 0.704 |
0.7443 |