PROTEIN: Rep_252_c_2_20
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Protein File & Metadata
Source:
Rep_252_c_2_20.pdb
Genome ID:
Protein ID:
Rep_252_c_2_20
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Protein Sequence
MKKLLLIAAM AASCGTAMAQ DNVEGKVIDL LPEGVTLDVG TERKMDKQKN VVVAGSPIKG 60 YKAFFAAKDS EHGVELWVTD GTVAGTHMVK DIVASDGSSS PAYLSRFNDK VVFSAVSDDG 120 SGREPWISDG TAEGTFQLAD CYSTGDGDPQ FFMQCNENQV VFAAIDDESA EYDPDNGSQY 180 WVWVTDGTKE GTKRISDNVK VDVSPKETTN QNYRYARVGR KVFFRGDNPD GQFGTELCVS 240 DGTTEGTKIV KDINYEENKD ATAKGLTGYT RDSAIDQMEN YNNQYCFFKA WDPAHGNEWW 300 ASDGTEDGTY LVWDSKPAKD ANGIGESGDC FGPSREVIFG RIWSRVATNE YGDELGGYNM 360 KKDDHVIFDI NDIAPTANNS SYPDPACEFQ KNMFFCGAHG FDAADLDHNW GGELWIYDGK 420 TKPQMQYNFC PGTKSDWVKE LTVAGGSLYW YNEANDDPAV YGNGLYRLDE STDKPIVCPH 480 LTATGDAVHT LRNLGGQILY CSATTNRLYL FQYHKPGWDG KSDMGILEPI YDGVVDKTDP 540 SYVDPYQKAL TGIHNINAAK KNNGKVYTLD GMVVRSDADA NDATKGLQKG VYIVNGKKVV 600 NQ 602
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8IKV8-F1-model_v4 | 21 | 550 | 63 | 687 | 0.4675 |
0.6267 |
| AF-F1LMH7-F1-model_v4 | 3 | 504 | 12 | 553 | 0.465 |
0.6172 |
| AF-A0A2R8QSL0-F1-model_v4 | 1 | 504 | 12 | 544 | 0.459 |
0.6018 |
| AF-P97321-F1-model_v4 | 40 | 504 | 55 | 554 | 0.4563 |
0.6483 |
| AF-Q12884-F1-model_v4 | 1 | 504 | 16 | 555 | 0.4556 |
0.6036 |
| AF-U7PIR8-F1-model_v4 | 25 | 560 | 700 | 1515 | 0.3972 |
0.6315 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2WYV3 | CBM96 | 27 | 581 | 78 | 1033 | 0.4689 |
0.6446 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2WYV3 | CBM96 | 27 | 581 | 78 | 1033 | 0.4689 |
0.6446 |
| A0A518K3X6 | PL42 | 2 | 519 | 11 | 453 | 0.4135 |
0.6181 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nmt-assembly1.cif.gz_B | 17 | 547 | 9 | 567 | 0.5319 |
0.635 |
| 5nni-assembly1.cif.gz_B | 17 | 546 | 8 | 561 | 0.5309 |
0.6323 |
| 4po7-assembly1.cif.gz_A | 19 | 549 | 6 | 572 | 0.5291 |
0.6324 |
| 5nni-assembly1.cif.gz_A | 17 | 547 | 8 | 561 | 0.5274 |
0.6272 |
| 5znn-assembly1.cif.gz_A | 19 | 547 | 7 | 559 | 0.5272 |
0.6257 |
| 5mri-assembly1.cif.gz_A | 19 | 549 | 5 | 572 | 0.5265 |
0.6305 |
| 5znn-assembly1.cif.gz_B | 19 | 539 | 7 | 550 | 0.5259 |
0.6345 |
| 4n7e-assembly1.cif.gz_A | 19 | 549 | 5 | 563 | 0.5254 |
0.6258 |
| 3f6k-assembly1.cif.gz_A | 20 | 549 | 5 | 566 | 0.5243 |
0.6259 |
| 5mrh-assembly1.cif.gz_A | 19 | 548 | 3 | 554 | 0.5229 |
0.6177 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A5D7B7-F1-model_v4 | 1 | 504 | 16 | 554 | 0.4575 |
0.6058 |
| AF-P97321-F1-model_v4 | 40 | 504 | 55 | 554 | 0.4563 |
0.6483 |
| AF-Q12884-F1-model_v4 | 1 | 504 | 16 | 555 | 0.4556 |
0.6036 |
| AF-Q6FPF1-F1-model_v4 | 26 | 545 | 680 | 1453 | 0.3941 |
0.639 |
| AF-C7YGZ0-F1-model_v4 | 18 | 597 | 704 | 1500 | 0.3902 |
0.5755 |