PROTEIN: Rep_2477_c_20_8
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Protein File & Metadata
Source:
Rep_2477_c_20_8.pdb
Genome ID:
Protein ID:
Rep_2477_c_20_8
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Protein Sequence
MAVTVKKERG KGGKAFWGLP GLLGQEPGLW LEKKEDALSG STHHASCFLA WEDGQPPARI 60 FVDKSAELSR KRGESCALFG LLMGKKQEAV QAVLEAAERE ARRLGAARLL GPLHPRDWEQ 120 GRGLLLGGEC FGRRDPDWMR ECLEKKGYRE WKAWDVLTIK AEQIPVLRLE KAAAWAKQRH 180 GYVAVSMGPE NTRRMAGDVA AILRAAGEYP QNGFGKMARE MGYLLDPTVS YIVYDRAGRP 240 AACLAGMPDY DWIARQMQGR WGLRHAGEFQ RLCAKAPGCR FFLQAAVPAA QGKGAILAAY 300 AAALEGVEKR GYSYIQAGLM GEVAWLSRHT CRALGGTPAC RAAVFEKNL 349
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8EWX4-F1-model_v4 | 1 | 349 | 18 | 393 | 0.7413 |
0.8097 |
| AF-Q46840-F1-model_v4 | 1 | 349 | 16 | 390 | 0.7399 |
0.8044 |
| AF-K0EMI4-F1-model_v4 | 1 | 349 | 11 | 314 | 0.6538 |
0.7353 |
| AF-K0EML1-F1-model_v4 | 2 | 349 | 1 | 313 | 0.6311 |
0.6927 |
| AF-K0EYT8-F1-model_v4 | 1 | 348 | 10 | 259 | 0.6227 |
0.7559 |
| AF-O25065-F1-model_v4 | 8 | 349 | 1 | 290 | 0.6089 |
0.6908 |
| AF-A0A1D6J7B6-F1-model_v4 | 11 | 349 | 1 | 348 | 0.5948 |
0.6687 |
| AF-K0F7Q2-F1-model_v4 | 21 | 349 | 19 | 282 | 0.5866 |
0.7114 |
| AF-Q20811-F1-model_v4 | 1 | 347 | 19 | 316 | 0.5861 |
0.6932 |
| AF-Q54DW0-F1-model_v4 | 2 | 349 | 1 | 321 | 0.5844 |
0.6339 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 349 | 17 | 339 | 0.6766 |
0.743 |
| AF-A0A5K7YHP0-F1-model_v4 | GT4 | 1 | 349 | 345 | 693 | 0.5007 |
0.678 |
| AF-B8JF70-F1-model_v4 | GT4 | 1 | 349 | 107 | 672 | 0.4918 |
0.6601 |
| AF-B4UGN4-F1-model_v4 | GT4 | 1 | 349 | 344 | 672 | 0.49 |
0.691 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 349 | 411 | 739 | 0.4839 |
0.6978 |
| BDG08718.1 | GT4 | 1 | 349 | 392 | 725 | 0.4805 |
0.6852 |
| AF-Q2IPR1-F1-model_v4 | GT4 | 1 | 349 | 91 | 671 | 0.48 |
0.6443 |
| AF-A0A6H1RBS1-F1-model_v4 | GT1 | 1 | 349 | 333 | 638 | 0.4795 |
0.7178 |
| A0R4V1 | GT2 | 1 | 349 | 302 | 653 | 0.4791 |
0.645 |
| AF-A0A6M4Q982-F1-model_v4 | GT4 | 1 | 349 | 381 | 717 | 0.4735 |
0.6699 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 349 | 17 | 339 | 0.6766 |
0.743 |
| A0A5K7YHP0 | GT4 | 1 | 349 | 345 | 693 | 0.5007 |
0.678 |
| B8JF70 | GT4 | 1 | 349 | 107 | 672 | 0.4918 |
0.6601 |
| BDG08718.1 | GT4 | 1 | 349 | 392 | 725 | 0.4805 |
0.6852 |
| A0A6H1RBS1 | GT1 | 1 | 349 | 333 | 638 | 0.4795 |
0.7178 |
| A0R4V1 | GT2 | 1 | 349 | 302 | 653 | 0.4791 |
0.645 |
| A0A7U2MF49 | GH3 | 1 | 349 | 505 | 833 | 0.4681 |
0.6993 |
| A0A4U1HM25 | GT4 | 1 | 349 | 347 | 677 | 0.4663 |
0.6564 |
| A0A0F6WPF6 | GT4 | 1 | 349 | 385 | 714 | 0.4601 |
0.6627 |
| A0A1Y0CB11 | GT4 | 1 | 349 | 403 | 736 | 0.46 |
0.6612 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2c27-assembly1.cif.gz_A | 7 | 348 | 1 | 301 | 0.6867 |
0.7577 |
| 1p0h-assembly1.cif.gz_A | 4 | 347 | 1 | 290 | 0.6819 |
0.7651 |
| 3iwg-assembly1.cif.gz_A | 3 | 348 | 1 | 268 | 0.6689 |
0.7758 |
| 5kgh-assembly1.cif.gz_A | 3 | 349 | 1 | 315 | 0.6688 |
0.7304 |
| 5kga-assembly1.cif.gz_B | 3 | 349 | 1 | 315 | 0.665 |
0.7266 |
| 5kf2-assembly1.cif.gz_A | 2 | 349 | 1 | 315 | 0.6639 |
0.7262 |
| 5kgh-assembly1.cif.gz_B | 3 | 349 | 1 | 312 | 0.6612 |
0.7253 |
| 5kf1-assembly1.cif.gz_B | 3 | 349 | 1 | 311 | 0.6602 |
0.7251 |
| 2wpw-assembly4.cif.gz_D | 2 | 349 | 1 | 322 | 0.6588 |
0.7132 |
| 7q3a-assembly1.cif.gz_A | 2 | 349 | 19 | 339 | 0.6526 |
0.7212 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 349 | 16 | 390 | 0.7399 |
0.8044 |
| AF-D3Q4A8-F1-model_v4 | 2 | 349 | 1 | 306 | 0.7309 |
0.7988 |
| AF-A0LWI8-F1-model_v4 | 1 | 349 | 3 | 320 | 0.7044 |
0.7696 |
| AF-C7QKH8-F1-model_v4 | 2 | 347 | 1 | 314 | 0.7037 |
0.7632 |
| AF-D2S4P5-F1-model_v4 | 1 | 349 | 1 | 308 | 0.7033 |
0.7706 |
| AF-A8LYQ4-F1-model_v4 | 1 | 348 | 4 | 307 | 0.7022 |
0.7746 |
| AF-Q5EDG0-F1-model_v4 | 3 | 347 | 1 | 301 | 0.6993 |
0.7712 |
| AF-B2GI63-F1-model_v4 | 1 | 347 | 1 | 303 | 0.6979 |
0.7693 |
| AF-A4X1M6-F1-model_v4 | 1 | 348 | 6 | 307 | 0.6978 |
0.7761 |
| AF-C6WPR7-F1-model_v4 | 3 | 347 | 1 | 297 | 0.6952 |
0.7723 |