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PROTEIN: Rep_2459_c_17_3

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Protein File & Metadata
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Source:
Rep_2459_c_17_3.pdb
Genome ID:
Rep_2459
Protein ID:
Rep_2459_c_17_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKSPFAARIK   YSVPTFLPLE   MKLADFEKNA   SVPFAVAVEG   EGFRKVYDWK   ICGDDKNRNA 60
DIFFTDKILQ   FMLWAFGGKK   VYLCGNNTAR   DIAEKYAPGH   EHAFDASFME   TIYRKKISFE 120
FLPYNEKPDE   FSSPSPVGGC   TEGSRIGLDL   GGTSIKSVLL   LNGVTAISEI   REWDPIANPD 180
PSYHYARISS   ALKSIAEKAG   KIDALGISTA   GIVSDGRILF   SSLFRSVPDD   MYHTHVRNFF 240
GRIAYDLGGN   VPLSVINDGD   ASALSGWKAN   AGRSVLGLSL   GTCLAAGYTD   KNGKISGYLN 300
ELAFVPADAS   SSAPEDEWSG   IKGAACCYLS   RQALRFRSDA   ANSVPAPAHY   EADRRQFEKT 360
SAETDASESF   FDVTGNRLAH   SVALFSRFYD   IDTVLIQGGL   LSGKNGETVL   GSCKKTLAAC 420
YPDLKAEIIL   PDEKSRRFGQ   AVAAACLNPF   PTKN 454
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8ZLQ8-F1-model_v4 143 452 1 290 0.6862 0.8501
AF-P45425-F1-model_v4 143 452 1 290 0.6772 0.8397
AF-Q32BB7-F1-model_v4 141 452 10 302 0.6744 0.8445
AF-I6Y8D3-F1-model_v4 143 451 1 302 0.6741 0.8206
AF-K0F0T1-F1-model_v4 143 452 1 298 0.6659 0.8318
AF-A0A132Z5L9-F1-model_v4 143 452 1 290 0.6622 0.8187
AF-A0A133D0E0-F1-model_v4 144 451 1 284 0.6619 0.8261
AF-Q8DNV3-F1-model_v4 142 451 1 293 0.6602 0.8153
AF-A0A132P7X3-F1-model_v4 143 452 1 290 0.6587 0.8175
AF-Q8DNS9-F1-model_v4 142 451 2 295 0.6568 0.8092
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 141 451 78 375 0.57 0.7939
AF-A0A7L4W925-F1-model_v4 GH170 142 439 1 294 0.4726 0.7794
A0A497ZP30 GH1 142 451 295 618 0.4621 0.7648
AF-A0A346SND6-F1-model_v4 GH1 142 451 452 775 0.4267 0.7696
AF-A0A222W361-F1-model_v4 GT2 142 452 366 652 0.4197 0.7591
AF-A0A5P9GJS8-F1-model_v4 GH1 142 452 452 776 0.3956 0.7039
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 141 451 78 375 0.57 0.7939
A0A7L4W925 GH170 142 439 1 294 0.4726 0.7794
A0A497ZP30 GH1 142 451 295 618 0.4621 0.7648
A0A222W361 GT2 142 452 366 652 0.4197 0.7591
A0A5P9GJS8 GH1 142 452 452 776 0.3956 0.7039
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6jdb-assembly1.cif.gz_A-2 143 451 1 289 0.6884 0.8531
6jdc-assembly1.cif.gz_A-2 143 452 1 269 0.6857 0.8714
2aa4-assembly1.cif.gz_B 143 451 1 289 0.6839 0.8471
7p9l-assembly1.cif.gz_BBB 142 449 3 306 0.6793 0.827
5f7r-assembly1.cif.gz_A 143 452 1 305 0.6785 0.824
5f7r-assembly1.cif.gz_E 143 452 1 303 0.6732 0.8197
1woq-assembly2.cif.gz_B 142 452 1 253 0.6593 0.8572
5f7p-assembly1.cif.gz_E 143 452 1 298 0.6589 0.8076
2yhy-assembly1.cif.gz_A 142 452 2 308 0.6587 0.7978
5nck-assembly1.cif.gz_B 143 451 1 289 0.6576 0.8183
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8FDU8-F1-model_v4 143 452 1 291 0.691 0.8529
AF-Q0T068-F1-model_v4 143 452 1 291 0.6874 0.8489
AF-B4T747-F1-model_v4 143 451 1 291 0.6873 0.8488
AF-Q8Z3F1-F1-model_v4 143 452 1 291 0.687 0.8485
AF-Q8X9H0-F1-model_v4 143 452 1 291 0.6869 0.8485
AF-B7UJV5-F1-model_v4 143 452 1 291 0.6869 0.8484
AF-A9MNY9-F1-model_v4 143 452 1 290 0.6868 0.8509
AF-Q8FD60-F1-model_v4 143 452 1 291 0.6867 0.8482
AF-B5YSU9-F1-model_v4 143 452 1 291 0.6867 0.8482
AF-P59437-F1-model_v4 143 452 1 291 0.6866 0.848
Download Full SwissProt Results