PROTEIN: Rep_240_c_14_9
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Protein File & Metadata
Source:
Rep_240_c_14_9.pdb
Genome ID:
Protein ID:
Rep_240_c_14_9
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Protein Sequence
MKNETDMIKA ALISVRRPVS GTVFLQAIAR IGQVFGPRHF WLAVLWLAVM PVTAQEWCRY 60 APLVTPSQEW EHRWVTCPLA DSLSHVWFRQ TYVTGSDEDV PVSAHLSFAS SGLVRVYVNE 120 CNVGTAQWYS PSEPISIDIT PYLNEDTNVV AVLYAPRVLR PENRHLSLSY YGFTESGRPF 180 CYMADSTWLC RVSPASGWLP DGGEWDDGRE AENPWRASQF DPALWMSAEE IDSDISSPDI 240 CGKTGVGTEM ASVSVSLSHV QGKSYFDPEK CAVNYAFSNG IYGQVRLTLR DARYGEVIRY 300 GRNIYICNGE MDEQASPLFS LDGFSRVYVS GDRYFQRSQI WDIEALTEVY D 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1CXD8-F1-model_v4 | 79 | 315 | 1 | 277 | 0.6097 |
0.8011 |
| AF-U7PL76-F1-model_v4 | 6 | 351 | 52 | 453 | 0.5059 |
0.7384 |
| AF-A0A1C1CLM9-F1-model_v4 | 7 | 351 | 53 | 448 | 0.4999 |
0.7425 |
| AF-U7PZH6-F1-model_v4 | 4 | 351 | 58 | 480 | 0.4935 |
0.727 |
| AF-A0A0H3GY38-F1-model_v4 | 8 | 351 | 36 | 433 | 0.4919 |
0.718 |
| AF-A0A0D2GKZ5-F1-model_v4 | 5 | 351 | 63 | 464 | 0.4899 |
0.7258 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0P0M349-F1-model_v4 | GH78 | 12 | 351 | 62 | 493 | 0.5962 |
0.7586 |
| AF-A0A1U9K7S6-F1-model_v4 | GH78 | 5 | 351 | 79 | 465 | 0.5816 |
0.7411 |
| AF-A0A0E4HDB8-F1-model_v4 | GH78 | 6 | 351 | 47 | 425 | 0.5524 |
0.7363 |
| AF-A0A0P0GLP3-F1-model_v4 | GH78 | 11 | 351 | 62 | 493 | 0.5378 |
0.7588 |
| AF-A0A6B9ZJD6-F1-model_v4 | GH78 | 5 | 351 | 4 | 343 | 0.5223 |
0.7446 |
| AF-A0A6P1MC54-F1-model_v4 | GH78 | 18 | 351 | 1 | 321 | 0.5202 |
0.7712 |
| AF-A0A6B8REE2-F1-model_v4 | GH78 | 5 | 351 | 51 | 463 | 0.5195 |
0.7598 |
| AF-D6CYE5-F1-model_v4 | GH78 | 5 | 351 | 98 | 485 | 0.5189 |
0.7299 |
| AF-A0A2D1U4G7-F1-model_v4 | GH78 | 5 | 351 | 84 | 486 | 0.5184 |
0.739 |
| UPK71361.1 | CBM67 , GH78 | 12 | 351 | 6 | 345 | 0.5178 |
0.7397 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| W0J0Y4 | GH78 | 12 | 351 | 1 | 330 | 0.5198 |
0.7564 |
| A0A6B8REE2 | GH78 | 5 | 351 | 51 | 463 | 0.5195 |
0.7598 |
| UPK71361.1 | CBM67 , GH78 | 12 | 351 | 6 | 345 | 0.5178 |
0.7397 |
| A0A416HE67 | GH78 | 21 | 351 | 1 | 333 | 0.5152 |
0.7548 |
| A0A6P1MC35 | GH78 | 16 | 351 | 7 | 328 | 0.5147 |
0.7613 |
| A0A942ECD0 | GH78 | 5 | 351 | 52 | 449 | 0.5146 |
0.7538 |
| A0A516Q0Z3 | GH78 | 9 | 351 | 24 | 361 | 0.5127 |
0.7426 |
| A5INB4 | GH78 | 5 | 351 | 47 | 421 | 0.5126 |
0.7437 |
| A0A1W5X9Z1 | GH78 | 6 | 351 | 47 | 429 | 0.5122 |
0.7367 |
| WFQ79908.1 | GH78 | 5 | 351 | 54 | 451 | 0.5121 |
0.7508 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6i60-assembly2.cif.gz_B | 5 | 351 | 52 | 437 | 0.5084 |
0.7395 |
| 6i60-assembly1.cif.gz_A | 5 | 351 | 52 | 437 | 0.5083 |
0.739 |
| 6gsz-assembly1.cif.gz_A | 5 | 351 | 47 | 425 | 0.507 |
0.7324 |
| 3w5n-assembly1.cif.gz_A | 5 | 351 | 48 | 593 | 0.4879 |
0.7391 |
| 6li7-assembly1.cif.gz_A | 4 | 251 | 41 | 335 | 0.4619 |
0.6339 |
| 6t0q-assembly1.cif.gz_A | 4 | 251 | 44 | 338 | 0.4593 |
0.6339 |
| 2okx-assembly1.cif.gz_A | 67 | 351 | 1 | 530 | 0.4397 |
0.7801 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KNB2-F1-model_v4 | 6 | 351 | 80 | 469 | 0.5049 |
0.746 |
| AF-P9WF03-F1-model_v4 | 6 | 351 | 77 | 465 | 0.5045 |
0.7438 |
| AF-T2KPL4-F1-model_v4 | 6 | 351 | 76 | 485 | 0.4943 |
0.7359 |
| AF-Q82PP4-F1-model_v4 | 5 | 351 | 50 | 595 | 0.4901 |
0.7429 |