PROTEIN: Rep_2393_c_0_1903
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Protein File & Metadata
Source:
Rep_2393_c_0_1903.pdb
Genome ID:
Protein ID:
Rep_2393_c_0_1903
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Protein Sequence
MKWRYAWREL WHHPLMMLLI FVQNVVVFAV TVSMISTIVS RYNTYREISD LVSGNGAVYT 60 LESYQDYYKN KEGEWHYSCA YTREEVESGL TDAKVQGCYN WGVGIDGDVQ SCSLTAYDDA 120 LWKCHRPAIA AGRWFSDRDK QTEELEVVIA QKGGKDGRYQ VGDTLSAEKE LRDWVNEGDD 180 TKISFKVIGI IENGASILGS KLDERNSKED YRTLFWNYYD YYNDGLYLFG IQSDLLRCKH 240 QHAGAWTEKM LGECFFSWET EDPKVISSNQ EKVMKNATAT DTKDYELIRR ESKKYIWEQV 300 RMILPILITL CIMTVLSTVC NMAIMVQKSL RNYAVYYING LSWKKCISIH IFSMILLEGG 360 SFLLMMAGLF LLKLGGALKY TVISPGLWQM AGCLLLCLLF TLFGIGVVRR ETHGVSAKEI 420 LTRGGE 426
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FVR0-F1-model_v4 | 1 | 426 | 2 | 351 | 0.5912 |
0.6697 |
| AF-Q58207-F1-model_v4 | 1 | 425 | 1 | 367 | 0.5774 |
0.6471 |
| AF-A0A133CMU8-F1-model_v4 | 2 | 426 | 1 | 356 | 0.5762 |
0.6494 |
| AF-K0F749-F1-model_v4 | 2 | 426 | 1 | 352 | 0.5687 |
0.6466 |
| AF-A0A132Z5B1-F1-model_v4 | 2 | 423 | 1 | 357 | 0.5579 |
0.6278 |
| AF-Q2G168-F1-model_v4 | 2 | 422 | 1 | 349 | 0.5578 |
0.6335 |
| AF-Q8DQH3-F1-model_v4 | 1 | 414 | 28 | 329 | 0.5545 |
0.6899 |
| AF-P9WG17-F1-model_v4 | 1 | 426 | 1 | 349 | 0.5466 |
0.6205 |
| AF-P9WG15-F1-model_v4 | 1 | 426 | 1 | 349 | 0.5301 |
0.6017 |
| AF-Q58902-F1-model_v4 | 1 | 426 | 8 | 399 | 0.5107 |
0.5649 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T1W6 | GH3 | 1 | 426 | 457 | 855 | 0.4563 |
0.6471 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7w78-assembly1.cif.gz_B | 2 | 426 | 1 | 344 | 0.5438 |
0.6228 |
| 5ws4-assembly1.cif.gz_B | 1 | 426 | 255 | 650 | 0.5268 |
0.6876 |
| 5nik-assembly1.cif.gz_J | 1 | 426 | 236 | 629 | 0.4848 |
0.627 |
| 7tcg-assembly1.cif.gz_A | 1 | 418 | 261 | 635 | 0.4834 |
0.654 |
| 5lj6-assembly1.cif.gz_A | 1 | 424 | 239 | 600 | 0.4191 |
0.5713 |
| 5lil-assembly1.cif.gz_A | 1 | 423 | 245 | 615 | 0.417 |
0.5624 |
| 5lil-assembly1.cif.gz_B | 1 | 424 | 246 | 604 | 0.4133 |
0.5686 |
| 5lj7-assembly1.cif.gz_B | 1 | 424 | 246 | 599 | 0.4121 |
0.5723 |
| 5lj7-assembly1.cif.gz_A | 1 | 424 | 245 | 592 | 0.4071 |
0.5723 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4L8L8-F1-model_v4 | 1 | 426 | 2 | 351 | 0.6009 |
0.6808 |
| AF-Q6G6W0-F1-model_v4 | 1 | 426 | 2 | 351 | 0.5987 |
0.6776 |
| AF-Q5HDJ5-F1-model_v4 | 1 | 426 | 2 | 351 | 0.5972 |
0.6765 |
| AF-Q49ZT7-F1-model_v4 | 2 | 426 | 1 | 350 | 0.5971 |
0.6768 |
| AF-Q8CRA9-F1-model_v4 | 1 | 426 | 2 | 350 | 0.5967 |
0.6771 |
| AF-Q6GE74-F1-model_v4 | 1 | 426 | 2 | 351 | 0.5952 |
0.6745 |
| AF-Q2YZ25-F1-model_v4 | 1 | 426 | 2 | 351 | 0.5946 |
0.6734 |
| AF-Q5HLN3-F1-model_v4 | 1 | 426 | 2 | 350 | 0.5936 |
0.6738 |
| AF-Q2FVR0-F1-model_v4 | 1 | 426 | 2 | 351 | 0.5912 |
0.6697 |
| AF-Q99RR7-F1-model_v4 | 1 | 426 | 2 | 351 | 0.591 |
0.6699 |