PROTEIN: Rep_2392_c_0_301
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Protein File & Metadata
Source:
Rep_2392_c_0_301.pdb
Genome ID:
Protein ID:
Rep_2392_c_0_301
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Protein Sequence
MRLYKDYKAF VGAGGLEKKL ATIFLNPNFH SVCLFRLANL FYRMHLSIIS KILWYINRML 60 FHVDIDYRAD LAGGFVLVHG LGTVIGKTVI SKGPLTVYQH VTIGGGNGKP SRFDSDGIKR 120 GMPMFMGKTV IYTGAIVVGG IIVSENSIIK AGRVVSEDI 159
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71405-F1-model_v4 | 1 | 159 | 1 | 153 | 0.818 |
0.9001 |
| AF-A0A132Z2H2-F1-model_v4 | 1 | 159 | 2 | 153 | 0.7952 |
0.8985 |
| AF-A0A077ZMK0-F1-model_v4 | 1 | 159 | 2 | 153 | 0.7848 |
0.886 |
| AF-Q8DQS9-F1-model_v4 | 1 | 159 | 2 | 153 | 0.738 |
0.887 |
| AF-Q2G2M7-F1-model_v4 | 1 | 159 | 3 | 156 | 0.7367 |
0.8899 |
| AF-Q0PAC7-F1-model_v4 | 1 | 159 | 3 | 157 | 0.7307 |
0.8722 |
| AF-Q9I210-F1-model_v4 | 1 | 159 | 28 | 192 | 0.7301 |
0.8782 |
| AF-Q7AQF4-F1-model_v4 | 1 | 159 | 1 | 154 | 0.7231 |
0.892 |
| AF-X8FD92-F1-model_v4 | 1 | 159 | 1 | 154 | 0.7227 |
0.8926 |
| AF-P95231-F1-model_v4 | 1 | 159 | 1 | 154 | 0.718 |
0.8888 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A447LR74-F1-model_v4 | GT2 | 1 | 159 | 31 | 218 | 0.6724 |
0.8143 |
| BCS39092.1 | GT4 | 1 | 159 | 195 | 353 | 0.6325 |
0.8965 |
| AF-A0A0K1Q0U6-F1-model_v4 | GT2 | 1 | 159 | 360 | 528 | 0.5516 |
0.8734 |
| AF-A0A7D3XW08-F1-model_v4 | PL12 | 22 | 159 | 1 | 123 | 0.4572 |
0.9564 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A447LR74 | GT2 | 1 | 159 | 31 | 218 | 0.6724 |
0.8143 |
| BCS39092.1 | GT4 | 1 | 159 | 195 | 353 | 0.6325 |
0.8965 |
| A0A0K1Q0U6 | GT2 | 1 | 159 | 360 | 528 | 0.5516 |
0.8734 |
| BDV43052.1 | GT4 | 1 | 159 | 3 | 154 | 0.5412 |
0.8977 |
| A0A7D3XW08 | PL12 | 22 | 159 | 1 | 123 | 0.4572 |
0.9564 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8i06-assembly1.cif.gz_A | 1 | 159 | 76 | 230 | 0.7086 |
0.8932 |
| 4n6b-assembly1.cif.gz_A | 1 | 159 | 71 | 219 | 0.7084 |
0.9109 |
| 1sst-assembly1.cif.gz_C-2 | 1 | 159 | 72 | 222 | 0.7079 |
0.9025 |
| 1sst-assembly1.cif.gz_B-2 | 1 | 159 | 72 | 221 | 0.7069 |
0.9055 |
| 4n6b-assembly2.cif.gz_F | 1 | 159 | 71 | 218 | 0.7067 |
0.913 |
| 4n6b-assembly2.cif.gz_B | 1 | 159 | 72 | 222 | 0.706 |
0.9006 |
| 4hzc-assembly2.cif.gz_I | 1 | 159 | 72 | 224 | 0.7057 |
0.9007 |
| 1ssq-assembly1.cif.gz_A | 1 | 159 | 72 | 226 | 0.7055 |
0.8852 |
| 4n6b-assembly1.cif.gz_E | 1 | 159 | 71 | 223 | 0.7045 |
0.8895 |
| 4n6a-assembly2.cif.gz_B | 1 | 159 | 76 | 228 | 0.7035 |
0.8951 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71405-F1-model_v4 | 1 | 159 | 1 | 153 | 0.818 |
0.9001 |
| AF-Q9ZK14-F1-model_v4 | 1 | 159 | 1 | 153 | 0.8175 |
0.8995 |
| AF-P0ACD1-F1-model_v4 | 3 | 159 | 1 | 145 | 0.7821 |
0.8815 |
| AF-P67765-F1-model_v4 | 1 | 159 | 1 | 154 | 0.7405 |
0.8909 |
| AF-Q5HIE6-F1-model_v4 | 1 | 159 | 1 | 154 | 0.74 |
0.8905 |
| AF-P67766-F1-model_v4 | 1 | 159 | 1 | 154 | 0.74 |
0.8904 |
| AF-Q8CTU2-F1-model_v4 | 1 | 159 | 1 | 154 | 0.7399 |
0.8904 |
| AF-Q65PC9-F1-model_v4 | 1 | 159 | 2 | 155 | 0.7386 |
0.8934 |
| AF-A8F961-F1-model_v4 | 1 | 159 | 2 | 155 | 0.7374 |
0.8937 |
| AF-Q5HRM4-F1-model_v4 | 1 | 159 | 1 | 154 | 0.7369 |
0.887 |