PROTEIN: Rep_2390_c_1_1539
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Protein File & Metadata
Source:
Rep_2390_c_1_1539.pdb
Genome ID:
Protein ID:
Rep_2390_c_1_1539
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Protein Sequence
MRKKNFSKKL LSMALAGSLV VGMTSTLSGC GNKKNGTITL DVYSMLANYS GIQSGWGADL 60 LKQKFNVKLN YVQSDSGTFD TRMETGDLGD IVVFGNDNNE YVQAVNNKAL YNWEEDNLLK 120 DYGPYIKKHL SAALKKNKNL TKQITKGKSD ALYGFGGNAA ATNDDHQSFI YTWDIRWDLY 180 KQLGYPQVKN LDDLGKLLKD MQKICPKDDS GNKTYGLSMW PDWDDAMVMY VKAAATAYFG 240 YDELGLGLYD SNTGEYHDAL EENGPYLTML KFFNGLYRDG LIDPDSMTQT VDQVGEKVRN 300 GGVFFSIFNY AGSLVYNSQE HQSAGKMMCS LKPTEASPIV YGMNMQGGDH IWSIGAKSEY 360 PELAMEVINF LSTPEGYMDM QYGPKGECWN YDKNGNTYFT DLGKKCHGNA NTKMGSKHKG 420 KYQDGMIQIN NTTWSIDAEN PESVKGETYN CESWKSNNEK ASCDVEQDWR DKTGAKTVNE 480 YMEQGKYTVA PGTSYSAESK SDELKTTWGQ VTDNIKADSW KAIYAKTSKA YDEIVSKMIR 540 TTKKYGYDKC LKWSKDEAAK RRALELEATQ K 571
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 14 | 567 | 15 | 502 | 0.6682 |
0.7493 |
| AF-A0A133D019-F1-model_v4 | 16 | 564 | 27 | 485 | 0.6478 |
0.7535 |
| AF-Q8DRJ6-F1-model_v4 | 1 | 570 | 17 | 514 | 0.5926 |
0.6609 |
| AF-A0A0H3GX53-F1-model_v4 | 31 | 557 | 19 | 428 | 0.5715 |
0.6936 |
| AF-A0A133CPC5-F1-model_v4 | 29 | 553 | 27 | 423 | 0.5704 |
0.7063 |
| AF-P0AEX9-F1-model_v4 | 14 | 553 | 20 | 396 | 0.5694 |
0.7142 |
| AF-K0F002-F1-model_v4 | 30 | 554 | 45 | 439 | 0.5591 |
0.7068 |
| AF-P59214-F1-model_v4 | 27 | 557 | 34 | 423 | 0.5465 |
0.6879 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 26 | 567 | 35 | 506 | 0.6614 |
0.7646 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 26 | 567 | 35 | 506 | 0.6614 |
0.7646 |
| K8EJG7 | CBM50 , CE4 | 26 | 556 | 27 | 416 | 0.5525 |
0.6909 |
| A0A7U1BNH7 | GH10 | 31 | 559 | 24 | 742 | 0.4475 |
0.5512 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 37 | 564 | 1 | 474 | 0.7362 |
0.8203 |
| 5g62-assembly2.cif.gz_B | 34 | 570 | 1 | 491 | 0.7267 |
0.7983 |
| 5h6u-assembly1.cif.gz_A | 32 | 567 | 4 | 487 | 0.712 |
0.7903 |
| 6fth-assembly1.cif.gz_A | 31 | 567 | 1 | 496 | 0.7106 |
0.7779 |
| 4tqu-assembly1.cif.gz_Q | 33 | 570 | 7 | 492 | 0.7105 |
0.79 |
| 3omb-assembly1.cif.gz_A | 25 | 567 | 1 | 503 | 0.7103 |
0.7731 |
| 6jhx-assembly2.cif.gz_B | 33 | 564 | 7 | 483 | 0.7078 |
0.7925 |
| 3vlw-assembly2.cif.gz_B | 32 | 567 | 6 | 489 | 0.7077 |
0.787 |
| 5g5y-assembly1.cif.gz_A | 31 | 571 | 1 | 494 | 0.6811 |
0.7509 |
| 5suo-assembly1.cif.gz_A | 33 | 567 | 1 | 451 | 0.6715 |
0.7664 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 20 | 571 | 24 | 538 | 0.6829 |
0.7533 |
| AF-P37966-F1-model_v4 | 27 | 563 | 28 | 502 | 0.673 |
0.771 |
| AF-Q795R2-F1-model_v4 | 27 | 563 | 30 | 498 | 0.6257 |
0.7233 |
| AF-Q8YCE2-F1-model_v4 | 32 | 556 | 24 | 421 | 0.5749 |
0.7083 |
| AF-O06875-F1-model_v4 | 32 | 556 | 24 | 421 | 0.5748 |
0.7088 |
| AF-Q8FVX5-F1-model_v4 | 32 | 556 | 24 | 421 | 0.5742 |
0.708 |
| AF-P0AEX9-F1-model_v4 | 14 | 553 | 20 | 396 | 0.5694 |
0.7142 |
| AF-P19576-F1-model_v4 | 14 | 553 | 20 | 396 | 0.5692 |
0.7141 |
| AF-P0AEY0-F1-model_v4 | 15 | 553 | 21 | 396 | 0.5688 |
0.7156 |
| AF-O58758-F1-model_v4 | 31 | 556 | 40 | 420 | 0.5678 |
0.7251 |