PROTEIN: Rep_234_c_145_7
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Protein File & Metadata
Source:
Rep_234_c_145_7.pdb
Genome ID:
Protein ID:
Rep_234_c_145_7
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Protein Sequence
MYNFFNKIVR LFCLCVFLFG HSSADAQNKE LPVDINPYFG PVGKQPVVPN AAGFIQRWLL 60 LEPISMPVKS NVVFTDSYLK KIFHTQYFPK QMETVPKDGA VVKVGNEKLK WHALDSKLFN 120 VKLFRFATSF EKPKYGVLFW AVTIIDCPEE MKDVRLSVGS NGASMWWLNG EEAVMLEGDR 180 RMVRDDVVSK KLTLKKGRNI LRGAVINGPG MSDFCVRFID GQGKPVRNLS IHVK 234
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6L9W6-F1-model_v4 | 30 | 234 | 64 | 284 | 0.336 |
0.6208 |
| AF-Q76KP1-F1-model_v4 | 43 | 234 | 115 | 282 | 0.3212 |
0.7142 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5633 |
0.9831 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 32 | 234 | 382 | 700 | 0.5608 |
0.9725 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 32 | 234 | 482 | 697 | 0.5531 |
0.9576 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5063 |
0.9582 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 42 | 234 | 21 | 214 | 0.4597 |
0.8519 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 1 | 234 | 13 | 837 | 0.4423 |
0.6991 |
| A0A380YJ87 | GH20 | 2 | 234 | 13 | 837 | 0.4422 |
0.7016 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 23 | 234 | 63 | 277 | 0.4317 |
0.8038 |
| AF-A0A1H1SHM5-F1-model_v4 | GH2 | 5 | 234 | 809 | 1132 | 0.4258 |
0.7272 |
| AF-A0A3B7MTU4-F1-model_v4 | GH2 | 5 | 234 | 785 | 1117 | 0.4256 |
0.7247 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5633 |
0.9831 |
| D7SFH3 | GH43_2 | 32 | 234 | 482 | 697 | 0.5531 |
0.9576 |
| A0A7G9XVI1 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5063 |
0.9582 |
| A0A380YJ87 | GH20 | 2 | 234 | 13 | 837 | 0.4422 |
0.7016 |
| A0A1H1SHM5 | GH2 | 5 | 234 | 809 | 1132 | 0.4258 |
0.7272 |
| A0A344TID5 | GH163 | 28 | 224 | 17 | 202 | 0.4228 |
0.827 |
| A0A402CZV5 | GH4 | 49 | 223 | 458 | 622 | 0.4225 |
0.8602 |
| A0A495VIY0 | GH2 | 5 | 234 | 791 | 1116 | 0.4157 |
0.7074 |
| BCM93550.1 | GH2 | 14 | 234 | 729 | 1134 | 0.413 |
0.7322 |
| A0A517YSN2 | GH31 | 11 | 234 | 546 | 1049 | 0.4058 |
0.7168 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6L9W6-F1-model_v4 | 30 | 234 | 64 | 284 | 0.336 |
0.6208 |
| AF-Q76KP1-F1-model_v4 | 43 | 234 | 115 | 282 | 0.3212 |
0.7142 |