dbCAN Logo

PROTEIN: Rep_2338_c_11_15

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_2338_c_11_15.pdb
Genome ID:
Rep_2338
Protein ID:
Rep_2338_c_11_15

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MNFKKTTALF   LAAAMTTAAL   TACGGGSGSG   ETIGAAGTDG   GASKGGTITV   DFWTAPQQVQ 60
YNYWEAKANA   FNETKTEVNG   QVVEVKVQQM   PESPSSEAGI   QNAIATGTAP   AVSENINRGF 120
AATLAASEVI   YDLSAEDWFN   EVVEARQMGD   TMPNWAIDGK   QYVLPVYVNP   MVWQWNVKGL 180
EVLGYDKAPE   TIEEFTEVMK   AFGEKKDELA   EVGITHSFYR   PSLTRPDQYW   DRWYDFMMPY 240
DAISQGKTVV   EGGKLTMDKD   SAVKAMQVIG   TFGNTIQQGE   LSSIWVEEKP   SVLVTINAPW 300
EISLYKENNK   VYGEDYVYGP   AFVEKAGDIP   YNFGDSKGLT   FYKTENISED   EHAGAVEFVK 360
WVYNKENSAQ   TDLDWLNATT   MLPVRGDLND   NEAFKAVMDE   YPELSALAQW   VPYSMPGLAT 420
DKDADIWTAF   TETAMAPYMN   DVANAQAGNA   PDATTYVEAA   MEAMKSAGGL   E 471
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132ZDH4-F1-model_v4 43 466 27 427 0.7339 0.8314
AF-K0F1Y0-F1-model_v4 46 471 49 433 0.7148 0.846
AF-P71619-F1-model_v4 46 471 34 429 0.7143 0.8293
AF-K0F2E6-F1-model_v4 46 471 41 437 0.7084 0.8259
AF-Q8DNU8-F1-model_v4 25 471 24 440 0.7015 0.7825
AF-K0EWS9-F1-model_v4 43 471 48 463 0.6991 0.7983
AF-P9WGU9-F1-model_v4 21 471 22 464 0.6929 0.7497
AF-Q8DNN7-F1-model_v4 12 471 27 435 0.6879 0.7795
AF-K0F002-F1-model_v4 44 471 44 439 0.6866 0.7999
AF-A0A0H3GHK7-F1-model_v4 45 471 20 427 0.6767 0.7679
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 28 471 23 493 0.6033 0.6815
A0A9Q8PNJ5 GH4 1 471 260 866 0.5689 0.7417
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 471 23 797 0.5411 0.6863
AF-A0A1B0VLS2-F1-model_v4 CBM0 12 471 528 949 0.5317 0.796
A0A242CSU4 CBM35 14 471 562 969 0.5272 0.8199
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 28 471 23 493 0.6033 0.6815
A0A9Q8PNJ5 GH4 1 471 260 866 0.5689 0.7417
A0A1Q2TKJ3 GH49 1 471 23 797 0.5411 0.6863
A0A242CSU4 CBM35 14 471 562 969 0.5272 0.8199
A0A7U1BNH7 GH10 29 471 11 737 0.5246 0.686
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4gqo-assembly1.cif.gz_A 47 471 1 404 0.8496 0.9248
6dtr-assembly1.cif.gz_A 47 471 1 393 0.7728 0.8576
7bvt-assembly1.cif.gz_A 46 471 1 391 0.7665 0.8542
3uor-assembly2.cif.gz_B 47 471 1 388 0.7658 0.8617
7v09-assembly2.cif.gz_B 46 471 1 403 0.7648 0.8392
6dtt-assembly1.cif.gz_A 48 470 1 373 0.7591 0.8612
3quf-assembly1.cif.gz_A 44 469 1 385 0.759 0.8499
4hs7-assembly2.cif.gz_B 44 471 1 376 0.7545 0.8531
1peb-assembly1.cif.gz_A 46 466 3 366 0.7537 0.8662
1n3x-assembly1.cif.gz_A 47 466 3 366 0.7502 0.8628
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76042-F1-model_v4 40 471 21 430 0.7479 0.8332
AF-Q55471-F1-model_v4 24 471 11 421 0.7119 0.7865
AF-Q9K491-F1-model_v4 35 471 19 424 0.7113 0.7983
AF-O31518-F1-model_v4 43 470 28 427 0.7109 0.8106
AF-P94528-F1-model_v4 16 469 24 433 0.6963 0.7827
AF-P9WGU8-F1-model_v4 20 471 23 464 0.6934 0.7517
AF-P9WGU9-F1-model_v4 21 471 22 464 0.6929 0.7497
AF-Q8FVS7-F1-model_v4 25 471 14 411 0.6789 0.7677
AF-Q578M8-F1-model_v4 24 471 12 411 0.6778 0.7635
AF-Q2YKZ9-F1-model_v4 23 471 15 411 0.6753 0.7655
Download Full SwissProt Results