PROTEIN: Rep_230_c_4_28
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Protein File & Metadata
Source:
Rep_230_c_4_28.pdb
Genome ID:
Protein ID:
Rep_230_c_4_28
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Protein Sequence
MKILIADSGS TKTDWALVDE QGNVMVTCKT QGISPIHQSD AEILDVLCKE LVLSEQPQAV 60 FFYGSGVTEA MKSRMKSLLQ QSFPEAKVEA EGDMLGAARA LFGKKPGIAC ILGTGANSCL 120 YDGEKIVMNT PPLGYILGDE GSGAVIGKLF LNGIFKGTLP VSLKNKYLAW SGLDYPTIIN 180 KVYRQPLANR FLASICPFIS EQIAEGEKHE NGTDELNEAM SLYRMILESF NQFYAKNLTP 240 YIKYVKASTE DISQLEPGMK AWHSSLEEEI PMLGFVGSIA HYFESPLRNV MEDEFHLKIS 300 QILKAPMPGL IKYHVN 316
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F253-F1-model_v4 | 1 | 316 | 2 | 289 | 0.7737 |
0.8463 |
| AF-Q54PM7-F1-model_v4 | 1 | 316 | 4 | 316 | 0.7556 |
0.7901 |
| AF-K0F439-F1-model_v4 | 1 | 316 | 3 | 295 | 0.7502 |
0.8208 |
| AF-G4VHY4-F1-model_v4 | 1 | 316 | 3 | 326 | 0.7457 |
0.7949 |
| AF-Q8LGE0-F1-model_v4 | 1 | 316 | 30 | 347 | 0.7336 |
0.7914 |
| AF-A0A0R4IUJ5-F1-model_v4 | 1 | 316 | 3 | 328 | 0.7333 |
0.7847 |
| AF-A0A077YYG4-F1-model_v4 | 1 | 316 | 8 | 329 | 0.7314 |
0.7829 |
| AF-Q9VF86-F1-model_v4 | 1 | 316 | 2 | 321 | 0.729 |
0.7844 |
| AF-Q6K438-F1-model_v4 | 1 | 316 | 18 | 335 | 0.7277 |
0.7823 |
| AF-B6U9K4-F1-model_v4 | 1 | 316 | 22 | 336 | 0.7251 |
0.7847 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4P7INZ0-F1-model_v4 | GH9 | 1 | 316 | 3 | 282 | 0.7395 |
0.8183 |
| A0A165R9S5 | GH13_31 | 1 | 316 | 81 | 382 | 0.5754 |
0.6723 |
| A0A7S5UYA7 | GH25 | 1 | 316 | 2 | 316 | 0.5753 |
0.6083 |
| URD39880.1 | CE9 | 1 | 316 | 15 | 296 | 0.5622 |
0.8578 |
| AF-A0A222W361-F1-model_v4 | GT2 | 1 | 316 | 367 | 650 | 0.4497 |
0.6725 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A165R9S5 | GH13_31 | 1 | 316 | 81 | 382 | 0.5754 |
0.6723 |
| A0A7S5UYA7 | GH25 | 1 | 316 | 2 | 316 | 0.5753 |
0.6083 |
| URD39880.1 | CE9 | 1 | 316 | 15 | 296 | 0.5622 |
0.8578 |
| A0A222W361 | GT2 | 1 | 316 | 367 | 650 | 0.4497 |
0.6725 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1zbs-assembly1.cif.gz_A-2 | 2 | 316 | 1 | 280 | 0.8893 |
0.9565 |
| 8oqw-assembly2.cif.gz_D | 2 | 316 | 1 | 278 | 0.8824 |
0.9494 |
| 1zxo-assembly2.cif.gz_B | 2 | 316 | 1 | 278 | 0.8722 |
0.9431 |
| 1zxo-assembly1.cif.gz_F | 2 | 315 | 1 | 274 | 0.8683 |
0.9419 |
| 8oqk-assembly1.cif.gz_A-2 | 2 | 316 | 1 | 277 | 0.8639 |
0.9337 |
| 1zxo-assembly1.cif.gz_A | 4 | 316 | 1 | 263 | 0.8555 |
0.9495 |
| 8ow9-assembly1.cif.gz_B | 2 | 315 | 1 | 277 | 0.8303 |
0.9023 |
| 8ow7-assembly3.cif.gz_D | 2 | 316 | 1 | 277 | 0.8298 |
0.9016 |
| 8ow9-assembly3.cif.gz_C | 2 | 315 | 1 | 274 | 0.8207 |
0.897 |
| 1zc6-assembly1.cif.gz_A | 1 | 316 | 4 | 285 | 0.7497 |
0.8179 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q54PM7-F1-model_v4 | 1 | 316 | 4 | 316 | 0.7556 |
0.7901 |
| AF-Q97ML3-F1-model_v4 | 1 | 316 | 2 | 303 | 0.7287 |
0.7778 |
| AF-Q3SZM9-F1-model_v4 | 1 | 316 | 3 | 329 | 0.7252 |
0.7773 |
| AF-Q9QZ08-F1-model_v4 | 1 | 316 | 3 | 329 | 0.725 |
0.7762 |
| AF-P81799-F1-model_v4 | 1 | 316 | 3 | 329 | 0.7245 |
0.7758 |
| AF-Q9UJ70-F1-model_v4 | 1 | 316 | 3 | 329 | 0.7227 |
0.7743 |
| AF-Q9HLV3-F1-model_v4 | 1 | 316 | 5 | 301 | 0.7187 |
0.8057 |
| AF-Q9KUA9-F1-model_v4 | 1 | 316 | 2 | 280 | 0.7104 |
0.7953 |
| AF-Q8FDU8-F1-model_v4 | 1 | 316 | 1 | 288 | 0.6713 |
0.7243 |
| AF-B1XHJ5-F1-model_v4 | 1 | 316 | 1 | 288 | 0.6677 |
0.7209 |