PROTEIN: Rep_2275_c_21_4
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Protein File & Metadata
Source:
Rep_2275_c_21_4.pdb
Genome ID:
Protein ID:
Rep_2275_c_21_4
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Protein Sequence
MMNKKIRKLA ALCVFAVSVL SLAGCGGGGH QAADVDPDTP VSQVAFPLEE QAELSFITSA 60 PATSTQDPNE RMIFKRLEEQ TNVHIDWTCF VADQFADKKN LALAQFGNLP DGLFNAGMSD 120 YDLLRYAKQG IIIPLENLID KYMPNLQAVF EKYPEYRTMC TAPDGHIYSF PWIEQLGEGK 180 EAIQAIGDIP YINKKWLDCL GLDIPTTVDE LEQVLIAFRD NADKIQEECG VEGDVIPMSF 240 IINNGDQDPA ILINGFGEGY GDTADHFAVT DEGEVIYTAV QEGYKEGIAW LHKLVEEDLV 300 DPEAFTQEWS TYVAKGKNHR YGLCFTWDIA NIDNYDDYVM LPALAGPDGL VNITRQNNSE 360 TSGFERGRCV LTTSCRDTAL AAAWIDQMYA PLQSVQNNWG TYGEEGKPNI FEMSTNSEGG 420 EMLKHEDLGD NSPVEVRESQ SVNGPLAVLN DYYDVYVTQP DDAKWRLDNM HETYLEDMHS 480 QYVYPNVFMS IDDTNKVSQY DTDIKKYAEQ KKADWILNGG IEEEWDSYLE KMEDYGLSDY 540 LAIKQKYFDQ YQESLTQENT AATQDTQS 568
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 1 | 554 | 3 | 502 | 0.6678 |
0.7317 |
| AF-A0A133D019-F1-model_v4 | 12 | 554 | 16 | 485 | 0.6615 |
0.7514 |
| AF-Q8DRJ6-F1-model_v4 | 17 | 556 | 39 | 514 | 0.62 |
0.7171 |
| AF-A0A133CDW9-F1-model_v4 | 1 | 543 | 3 | 444 | 0.6073 |
0.7004 |
| AF-Q8DNU2-F1-model_v4 | 34 | 543 | 27 | 445 | 0.6063 |
0.7333 |
| AF-Q8DNU8-F1-model_v4 | 5 | 543 | 1 | 440 | 0.6057 |
0.6994 |
| AF-A0A133CPC5-F1-model_v4 | 21 | 540 | 6 | 423 | 0.604 |
0.7148 |
| AF-K0F7X1-F1-model_v4 | 30 | 540 | 26 | 409 | 0.603 |
0.7547 |
| AF-P19576-F1-model_v4 | 11 | 540 | 13 | 396 | 0.6016 |
0.7408 |
| AF-P0AEX9-F1-model_v4 | 13 | 539 | 13 | 396 | 0.6005 |
0.7398 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 35 | 554 | 35 | 506 | 0.7108 |
0.8184 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 49 | 549 | 27 | 745 | 0.4726 |
0.6078 |
| A0A9Q8PNJ5 | GH4 | 16 | 540 | 22 | 866 | 0.3995 |
0.5214 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 35 | 554 | 35 | 506 | 0.7108 |
0.8184 |
| A0A7U1BNH7 | GH10 | 49 | 549 | 27 | 745 | 0.4726 |
0.6078 |
| A0A9Q8PNJ5 | GH4 | 16 | 540 | 22 | 866 | 0.3995 |
0.5214 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g62-assembly2.cif.gz_B | 52 | 556 | 1 | 491 | 0.9103 |
0.981 |
| 5g5y-assembly1.cif.gz_A | 49 | 558 | 1 | 494 | 0.8109 |
0.8818 |
| 5xs8-assembly1.cif.gz_A | 51 | 548 | 1 | 474 | 0.7912 |
0.8732 |
| 6fth-assembly1.cif.gz_A | 49 | 554 | 1 | 496 | 0.7866 |
0.8534 |
| 4tqu-assembly1.cif.gz_Q | 44 | 556 | 3 | 492 | 0.7862 |
0.8591 |
| 5h6u-assembly1.cif.gz_A | 45 | 553 | 1 | 487 | 0.7828 |
0.8566 |
| 3omb-assembly1.cif.gz_A | 31 | 553 | 1 | 503 | 0.7816 |
0.8428 |
| 3vlw-assembly2.cif.gz_B | 44 | 552 | 2 | 489 | 0.7806 |
0.8542 |
| 6jhx-assembly2.cif.gz_B | 42 | 550 | 1 | 483 | 0.7794 |
0.8556 |
| 5suo-assembly1.cif.gz_A | 51 | 553 | 1 | 451 | 0.6793 |
0.7731 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 19 | 558 | 17 | 538 | 0.8346 |
0.8958 |
| AF-P37966-F1-model_v4 | 39 | 553 | 29 | 502 | 0.7019 |
0.8016 |
| AF-Q795R2-F1-model_v4 | 19 | 553 | 10 | 498 | 0.6407 |
0.7143 |
| AF-Q8FVS7-F1-model_v4 | 49 | 543 | 22 | 411 | 0.634 |
0.7843 |
| AF-Q578M8-F1-model_v4 | 49 | 543 | 22 | 411 | 0.6334 |
0.7835 |
| AF-Q2YKZ9-F1-model_v4 | 49 | 543 | 22 | 411 | 0.6332 |
0.7833 |
| AF-A0A0H2UMY0-F1-model_v4 | 50 | 556 | 37 | 491 | 0.6189 |
0.7292 |
| AF-Q7LYW7-F1-model_v4 | 43 | 543 | 36 | 450 | 0.6079 |
0.7428 |
| AF-O07009-F1-model_v4 | 37 | 543 | 29 | 420 | 0.6055 |
0.7536 |
| AF-O32156-F1-model_v4 | 23 | 543 | 13 | 422 | 0.6044 |
0.7265 |