PROTEIN: Rep_2275_c_18_8
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Protein File & Metadata
Source:
Rep_2275_c_18_8.pdb
Genome ID:
Protein ID:
Rep_2275_c_18_8
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Protein Sequence
MKTHIYRVLV NRAPAIRRKY QEARKEAVTR GARLLLFGKL LWWNLEYYLS GRRTQKTEIC 60 FMEKKKLLFE ESKNFTGMSG EHLVKELAGY DVISFDVFDT LLLRPFSAPE DLFYLIGTEL 120 HYPDFPVLRV LAEDQARKRK AEKTGAGEVT LKEIWECLEP LTGIPVETGM AVEMSTEEKY 180 CQGNLYFLPV LDSLKKGQKV LLAVSDMYLE KSFIQKLLEK YYGPVFHRVL ISQEEGCSKA 240 NGKLYEKVRE TAKEILAEQT GSAEGCWRLA HVGDNPHSDI FMAKKRQIDA FLYPNPQDTG 300 NPYRPFDMSR ITGGIYRGLV NIRFHTGAGK YSVFYELGYT YGGLAALGFC QFIHRKVQEW 360 ERCRICFLAR DGDVLNQVYD QLYPGSSTCY LLWSRNVSAR LGAERFPFDF FQRFLFQKIN 420 QGYSLERIFA SMRLSALRED ACRYLHCSKD SVLTEKRALG CRDFLLKQWE RVLEVYKGEQ 480 ALAGEYLRTL LLPPEEYVQN YGQEQRKIIL ADIGWAGSGP LGLEYVLHKT CGLSWKVHTL 540 LAGSSGAPSP DRDSSQGFFF ENQMDSYFFS QSHNRDLWKF HDLHKKHNLY LELLFTSPSP 600 SFQGFEKTEN GNINFLFAPK ESHEKEVREI QKGILDFVAD YQKYFGDFTA KGQGNISGRD 660 AYAPLVLLLK DTAFQKKLEK AFLWDIRENV E 691
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 101 | 691 | 1 | 581 | 0.7089 |
0.814 |
| AF-Q0P8I2-F1-model_v4 | 68 | 691 | 54 | 870 | 0.5098 |
0.6741 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WII09730.1 | GT111 | 13 | 691 | 139 | 931 | 0.6355 |
0.7522 |
| A0A975E9I4 | GT2 | 30 | 691 | 225 | 996 | 0.6206 |
0.7699 |
| WAJ24550.1 | GT2 | 68 | 691 | 135 | 939 | 0.6205 |
0.8192 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 68 | 691 | 134 | 941 | 0.6189 |
0.8211 |
| U5MZQ8 | GT2 | 68 | 691 | 134 | 941 | 0.6189 |
0.8211 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 68 | 691 | 134 | 943 | 0.6129 |
0.8121 |
| A0A974WXG9 | GT4 | 35 | 691 | 153 | 1021 | 0.6085 |
0.787 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 48 | 691 | 150 | 1006 | 0.6062 |
0.775 |
| UKD35065.1 | GT111 | 68 | 691 | 99 | 814 | 0.5994 |
0.7661 |
| A0A0U3BMS4 | GT111 | 66 | 691 | 130 | 847 | 0.5955 |
0.7663 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WII09730.1 | GT111 | 13 | 691 | 139 | 931 | 0.6355 |
0.7522 |
| A0A975E9I4 | GT2 | 30 | 691 | 225 | 996 | 0.6206 |
0.7699 |
| WAJ24550.1 | GT2 | 68 | 691 | 135 | 939 | 0.6205 |
0.8192 |
| U5MZQ8 | GT2 | 68 | 691 | 134 | 941 | 0.6189 |
0.8211 |
| A0A974WXG9 | GT4 | 35 | 691 | 153 | 1021 | 0.6085 |
0.787 |
| A0A078BDS9 | GT2 | 48 | 691 | 150 | 1006 | 0.6062 |
0.775 |
| UKD35065.1 | GT111 | 68 | 691 | 99 | 814 | 0.5994 |
0.7661 |
| A0A0U3BMS4 | GT111 | 66 | 691 | 130 | 847 | 0.5955 |
0.7663 |
| D5MIK3 | GT4 | 7 | 691 | 131 | 1455 | 0.5723 |
0.7839 |
| A0A1H2DMX7 | GT2 | 1 | 691 | 242 | 1530 | 0.571 |
0.7873 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 89 | 690 | 242 | 845 | 0.5756 |
0.7661 |
| 8a0m-assembly2.cif.gz_D | 89 | 690 | 271 | 856 | 0.5562 |
0.7617 |
| 8a0m-assembly2.cif.gz_C | 89 | 691 | 376 | 970 | 0.5507 |
0.7812 |
| 8a0m-assembly1.cif.gz_A | 89 | 691 | 375 | 969 | 0.5503 |
0.7806 |
| 8a0c-assembly1.cif.gz_A | 89 | 691 | 380 | 971 | 0.5483 |
0.7825 |
| 8a0c-assembly1.cif.gz_B | 90 | 691 | 381 | 971 | 0.5455 |
0.7788 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.