PROTEIN: Rep_2274_c_33_4
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Protein File & Metadata
Source:
Rep_2274_c_33_4.pdb
Genome ID:
Protein ID:
Rep_2274_c_33_4
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Protein Sequence
MKKNTIAVCD SEAGYAGTLA DYLNNRKKLP FRAEAFTDPE KFCHYAGLNH PEFLLIAEEN 60 LNSQIQALQI PHMIVLSSDR EPEHTDQNYI YKYQSAESLI REVMTYCQEA ILTDTVCGYE 120 KKLRLIGIYS PLGRCGQTLF ALTAGQIWGE SRNTLYLNME DYSGWQIFSE QDTWQNLSDL 180 FYCLRQGKSF PPLTDLVHSW GNLDYIAPVS SFEDLRNISG KEWTSLFVHL EKESSYHILV 240 LDIGNGIDQM FSILDQCTQI YMPVLDDWIS RQKIEQFKKI AFSFSDTLEM KIQELHLPLA 300 PCTEKGQDFP KNLLWGKWGT DIRKLLEVTP FHG 333
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HW97-F1-model_v4 | 4 | 333 | 1 | 379 | 0.5864 |
0.6564 |
| AF-X8F7I0-F1-model_v4 | 120 | 333 | 30 | 287 | 0.5798 |
0.833 |
| AF-P9WLT1-F1-model_v4 | 120 | 333 | 61 | 318 | 0.5533 |
0.834 |
| AF-Q0PC70-F1-model_v4 | 119 | 333 | 19 | 268 | 0.5415 |
0.7747 |
| AF-Q1LVD4-F1-model_v4 | 120 | 333 | 81 | 339 | 0.5218 |
0.8162 |
| AF-Q9CCX7-F1-model_v4 | 120 | 333 | 87 | 345 | 0.5195 |
0.8165 |
| AF-K0EHY3-F1-model_v4 | 48 | 333 | 167 | 1116 | 0.3697 |
0.66 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1U9NHZ6 | CBM48 | 123 | 333 | 1 | 256 | 0.5039 |
0.8474 |
| A0A7T4YL43 | CBM48 | 123 | 333 | 1 | 255 | 0.4713 |
0.8317 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3fkq-assembly1.cif.gz_A-2 | 1 | 332 | 1 | 354 | 0.5938 |
0.6288 |
| 7npe-assembly2.cif.gz_C | 118 | 333 | 103 | 395 | 0.499 |
0.8222 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B8GW31-F1-model_v4 | 119 | 333 | 2 | 263 | 0.5963 |
0.8237 |
| AF-P9WLT1-F1-model_v4 | 120 | 333 | 61 | 318 | 0.5533 |
0.834 |