PROTEIN: Rep_2271_c_50_3
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Protein File & Metadata
Source:
Rep_2271_c_50_3.pdb
Genome ID:
Protein ID:
Rep_2271_c_50_3
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Protein Sequence
MQGNKEQEKL DKYRAILRKN HTVYGKVQDC SKENILDSRI ESVLGPALNS FILWVLKEAE 60 RKQIKKLYFL ARDGYFMYRC ALLYCEKWHL PIECRYLSCS RYSLRIPSFH MNMEDALEYI 120 CRGGIDVNLD KILNRGGLEE REKKHVLKEV FKGRDAEESI PYAELTSVRE KLENCNFFME 180 CVARHSREAY PFLKGYLEQE GLLDKEKSAL VDSGWVGSMQ KTLNMVLNKL GREETLTGYY 240 WGLYELPEDV NREEYFCYYF SPEKGLREKV YFSNCLFEAI FSAPHGMTMS YRRTEKAYEP 300 CYAVIPAERQ RFMQRLESGL LAFTGNTIKE IKNIEEIDCV KYRDTIKKIF RLFMGYPTEE 360 EGEIFGKLEF SDDVLDEKQQ EVAAELNEAE LCANHVWNKA LVMLGFRNMY VKESAWYEGS 420 VARFGKRRGY HLFMYRLYKY LLYIRKNYYY RKTRRKK 457
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 14 | 433 | 207 | 631 | 0.6476 |
0.8213 |
| AF-Q0P8I2-F1-model_v4 | 1 | 444 | 68 | 976 | 0.4713 |
0.6733 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 14 | 449 | 635 | 1091 | 0.5823 |
0.8607 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 14 | 448 | 617 | 1067 | 0.5786 |
0.8512 |
| A0A974WXG9 | GT4 | 1 | 441 | 190 | 1078 | 0.5781 |
0.8473 |
| A0A1I7GMF6 | GT2 | 14 | 444 | 633 | 1083 | 0.5777 |
0.8613 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 31 | 441 | 8 | 403 | 0.563 |
0.771 |
| A0A9J7AXY3 | GT2 | 3 | 448 | 3 | 400 | 0.5485 |
0.7816 |
| V4JBH5 | GT2 | 3 | 443 | 2 | 397 | 0.5474 |
0.7954 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 29 | 441 | 7 | 405 | 0.5465 |
0.7998 |
| QRK05458.1 | GT4 | 16 | 455 | 249 | 991 | 0.5413 |
0.8114 |
| AF-M4S1R1-F1-model_v4 | GT4 | 16 | 437 | 219 | 699 | 0.5287 |
0.7936 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 14 | 448 | 617 | 1067 | 0.5786 |
0.8512 |
| A0A974WXG9 | GT4 | 1 | 441 | 190 | 1078 | 0.5781 |
0.8473 |
| A0A1I7GMF6 | GT2 | 14 | 444 | 633 | 1083 | 0.5777 |
0.8613 |
| A0A0U5F758 | GT2 | 31 | 441 | 8 | 403 | 0.563 |
0.771 |
| A0A9J7AXY3 | GT2 | 3 | 448 | 3 | 400 | 0.5485 |
0.7816 |
| V4JBH5 | GT2 | 3 | 443 | 2 | 397 | 0.5474 |
0.7954 |
| A0A0H3KC95 | GT2 | 29 | 441 | 7 | 405 | 0.5465 |
0.7998 |
| QRK05458.1 | GT4 | 16 | 455 | 249 | 991 | 0.5413 |
0.8114 |
| M4S1R1 | GT4 | 16 | 437 | 219 | 699 | 0.5287 |
0.7936 |
| W8KPG0 | GT2 | 7 | 445 | 3 | 398 | 0.5285 |
0.7901 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 18 | 368 | 241 | 591 | 0.5782 |
0.8424 |
| 8a0m-assembly1.cif.gz_B | 6 | 437 | 459 | 876 | 0.5388 |
0.7967 |
| 8a0c-assembly1.cif.gz_A | 6 | 437 | 597 | 1028 | 0.5304 |
0.795 |
| 8a0m-assembly2.cif.gz_C | 7 | 437 | 591 | 1024 | 0.5298 |
0.7948 |
| 8a0m-assembly1.cif.gz_A | 6 | 437 | 592 | 1023 | 0.5289 |
0.7913 |
| 8a0c-assembly1.cif.gz_B | 8 | 437 | 596 | 1025 | 0.5254 |
0.7896 |
| 8a0m-assembly2.cif.gz_D | 6 | 437 | 488 | 887 | 0.5091 |
0.7854 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.