PROTEIN: Rep_2271_c_0_139
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Protein File & Metadata
Source:
Rep_2271_c_0_139.pdb
Genome ID:
Protein ID:
Rep_2271_c_0_139
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Protein Sequence
MKKIAKRIII MLLMVTVGAV HAYGQWKQPI YDMTVDAAAY QNVGEISNGA EIEQEFVVHY 60 NGMNGLLIRT STWGRSNDKQ LTYELVNVKD DSVVAEGKLK ISEFVDNDYK EISFPEVKNS 120 KENQYRLTIR GDGVDTGEGI SIFTTKKENS AKSLKINGTE QNQALVLKVL AKEFNIKDFI 180 VLIGLLLYVV GFVKLLYKFL K 201
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0E3QJR3-F1-model_v4 | GT2 | 1 | 201 | 54 | 730 | 0.4591 |
0.7419 |
| AF-R4K848-F1-model_v4 | GT0 , GT2 | 1 | 177 | 357 | 927 | 0.43 |
0.8155 |
| AF-D2RDR5-F1-model_v4 | GT2 | 1 | 197 | 426 | 1041 | 0.4293 |
0.7596 |
| AF-Q97GN9-F1-model_v4 | GT0 , GT2 | 13 | 198 | 536 | 964 | 0.4269 |
0.7796 |
| AF-A0A1S8M8R4-F1-model_v4 | GT2 , GT4 | 1 | 176 | 526 | 945 | 0.4257 |
0.8181 |
| AF-A0A0H3J786-F1-model_v4 | GT0 , GT2 | 21 | 201 | 788 | 1034 | 0.4214 |
0.7881 |
| AF-A0A0E3PHH4-F1-model_v4 | GT2 | 1 | 201 | 278 | 857 | 0.409 |
0.7092 |
| AF-A0A0E3PR73-F1-model_v4 | GT2 | 20 | 201 | 411 | 1056 | 0.408 |
0.7693 |
| AF-A0A0E3L941-F1-model_v4 | GT2 | 23 | 201 | 429 | 1074 | 0.4004 |
0.7716 |
| A0A2P8MIG1 | GT0 , GT2 | 34 | 181 | 791 | 949 | 0.3919 |
0.8865 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D2RDR5 | GT2 | 1 | 197 | 426 | 1041 | 0.4293 |
0.7596 |
| A0A0E3PR73 | GT2 | 20 | 201 | 411 | 1056 | 0.408 |
0.7693 |
| A0A0E3L941 | GT2 | 23 | 201 | 429 | 1074 | 0.4004 |
0.7716 |
| A0A2P8MIG1 | GT0 , GT2 | 34 | 181 | 791 | 949 | 0.3919 |
0.8865 |
| A5CZ43 | GT4 | 22 | 147 | 438 | 561 | 0.3435 |
0.8124 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8h2i-assembly1.cif.gz_bG | 3 | 194 | 57 | 409 | 0.4353 |
0.6575 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.