PROTEIN: Rep_2224_c_84_6
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Protein File & Metadata
Source:
Rep_2224_c_84_6.pdb
Genome ID:
Protein ID:
Rep_2224_c_84_6
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Protein Sequence
MDYYLIATRT VGMELKCERL KNSAEKYRVE KLQKADILLT DYEEAACRNH QLVPGVSEEE 60 WTEILSADDF YEQLLNYNGS FLHSSAIVVE GKAYLISAGS QVGKSTHTRL WQEYLGTENT 120 MILNDDKPAV MRDANGVWFA FGTPWSGASD SNINACAPIG GVCVLERSDV NWIQPEKGPR 180 ILDDLLKQTI KPRDERRRST LINLFSNMVT AVPTYRMGVN MSLEAARMAY EFMTGRISMI 240 RQ 242
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q38BN8-F1-model_v4 | 1 | 236 | 35 | 496 | 0.5643 |
0.7888 |
| AF-Q4DTE4-F1-model_v4 | 1 | 236 | 35 | 492 | 0.5641 |
0.787 |
| AF-Q4E5Y9-F1-model_v4 | 1 | 236 | 35 | 492 | 0.5616 |
0.7835 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAC25127.1 | GT2 | 1 | 241 | 39 | 363 | 0.5715 |
0.8292 |
| AF-A0A494TL75-F1-model_v4 | GT2 | 1 | 239 | 33 | 354 | 0.5632 |
0.8155 |
| AF-A0A127EZJ5-F1-model_v4 | GT2 | 1 | 240 | 46 | 371 | 0.5598 |
0.8159 |
| UJB65639.1 | GT2 | 1 | 238 | 32 | 356 | 0.5593 |
0.8155 |
| AF-A0A1Z4BWH0-F1-model_v4 | GT2 | 1 | 239 | 39 | 364 | 0.5538 |
0.8103 |
| AF-A0A2K8U543-F1-model_v4 | GT2 | 1 | 240 | 77 | 402 | 0.5461 |
0.8095 |
| AF-A0A2U9PBD5-F1-model_v4 | GT2 | 1 | 242 | 470 | 826 | 0.5094 |
0.8012 |
| AF-A0A7L6BC24-F1-model_v4 | GT2 | 1 | 242 | 421 | 780 | 0.5088 |
0.7901 |
| AF-A0A1C4V1M9-F1-model_v4 | GT2 | 1 | 239 | 440 | 793 | 0.5038 |
0.7949 |
| AF-A0A7H8XP94-F1-model_v4 | GT2 | 1 | 238 | 423 | 775 | 0.503 |
0.7934 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAC25127.1 | GT2 | 1 | 241 | 39 | 363 | 0.5715 |
0.8292 |
| A0A127EZJ5 | GT2 | 1 | 240 | 46 | 371 | 0.5598 |
0.8159 |
| UJB65639.1 | GT2 | 1 | 238 | 32 | 356 | 0.5593 |
0.8155 |
| A0A2K8U543 | GT2 | 1 | 240 | 77 | 402 | 0.5461 |
0.8095 |
| A0A2U9PBD5 | GT2 | 1 | 242 | 470 | 826 | 0.5094 |
0.8012 |
| A0A160SYZ9 | GT2 | 1 | 238 | 387 | 734 | 0.494 |
0.7668 |
| QXQ07936.1 | GT2 | 35 | 236 | 16 | 233 | 0.4837 |
0.7611 |
| USE34901.1 | GT1 | 1 | 242 | 3 | 424 | 0.4608 |
0.7694 |
| A0A1Y6D201 | GT60 | 1 | 237 | 435 | 713 | 0.4563 |
0.708 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.