PROTEIN: Rep_2224_c_40_3
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Protein File & Metadata
Source:
Rep_2224_c_40_3.pdb
Genome ID:
Protein ID:
Rep_2224_c_40_3
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Protein Sequence
MITVTCCYTI SSLSDKYAVA KAKFSGNEFT FLMCSSMSFF LALSLPFQEI YFNAAWQSFI 60 AILLIAACKM LEFQMSALVL KQISAFELKA WLGINLFVSY ITDIISGMEA DDLKFIFIAV 120 TALGLVFIAK SGSSEKINYH SIIVPLMLYL AAKYGYGLII RSFSEYASPT MQLLPALIII 180 SVITIPKAVP RNIFQKNSSG AIKVILARIP NTIGMLAENA VISISLSDYS FIQPMVLVML 240 FLISLLRKEP HSRLNVIGSI ICVIGVISFQ ICGNL 275
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HYN8-F1-model_v4 | 1 | 275 | 12 | 291 | 0.8242 |
0.8708 |
| AF-Q2G1P2-F1-model_v4 | 1 | 275 | 12 | 290 | 0.8231 |
0.8705 |
| AF-A0A0H3GNU2-F1-model_v4 | 1 | 275 | 14 | 286 | 0.8152 |
0.8629 |
| AF-Q9I0D0-F1-model_v4 | 1 | 275 | 15 | 287 | 0.809 |
0.8557 |
| AF-K0F5D2-F1-model_v4 | 1 | 275 | 16 | 294 | 0.8076 |
0.877 |
| AF-K0F661-F1-model_v4 | 1 | 275 | 2 | 280 | 0.8073 |
0.862 |
| AF-A0A0H3GK88-F1-model_v4 | 1 | 275 | 13 | 292 | 0.8054 |
0.8538 |
| AF-Q5F951-F1-model_v4 | 1 | 275 | 4 | 285 | 0.8036 |
0.8516 |
| AF-A0A0H3GRE4-F1-model_v4 | 1 | 275 | 10 | 285 | 0.8002 |
0.8561 |
| AF-P44170-F1-model_v4 | 1 | 275 | 4 | 289 | 0.7982 |
0.8471 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 275 | 384 | 668 | 0.5857 |
0.8452 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 275 | 457 | 771 | 0.5674 |
0.8502 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 275 | 825 | 1113 | 0.5088 |
0.8262 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 275 | 104 | 412 | 0.4898 |
0.7705 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 275 | 384 | 668 | 0.5857 |
0.8452 |
| A0A3P6AF83 | GH28 | 1 | 275 | 457 | 771 | 0.5674 |
0.8502 |
| A0A7H8KSK8 | GT51 | 1 | 275 | 825 | 1113 | 0.5088 |
0.8262 |
| A0A4D6KI88 | GH1 | 1 | 275 | 104 | 412 | 0.4898 |
0.7705 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7b0k-assembly1.cif.gz_A | 1 | 271 | 5 | 255 | 0.7913 |
0.8586 |
| 5ogk-assembly1.cif.gz_B | 1 | 275 | 7 | 292 | 0.787 |
0.8418 |
| 5i20-assembly4.cif.gz_D | 1 | 273 | 7 | 280 | 0.7833 |
0.8248 |
| 5ogk-assembly1.cif.gz_A | 1 | 275 | 7 | 287 | 0.7808 |
0.8293 |
| 5ogk-assembly2.cif.gz_C | 1 | 275 | 8 | 289 | 0.7805 |
0.8316 |
| 6qsk-assembly2.cif.gz_G-2 | 1 | 275 | 8 | 291 | 0.7787 |
0.8327 |
| 5oge-assembly3.cif.gz_H-2 | 1 | 275 | 10 | 294 | 0.7777 |
0.8354 |
| 5oge-assembly2.cif.gz_B | 1 | 275 | 10 | 294 | 0.7774 |
0.8351 |
| 6qsk-assembly1.cif.gz_A | 1 | 275 | 7 | 287 | 0.7754 |
0.8244 |
| 5oge-assembly3.cif.gz_C | 1 | 275 | 10 | 297 | 0.7746 |
0.8358 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F8JJ22-F1-model_v4 | 1 | 275 | 10 | 286 | 0.8238 |
0.877 |
| AF-P71356-F1-model_v4 | 1 | 275 | 8 | 301 | 0.8174 |
0.8801 |
| AF-O34416-F1-model_v4 | 1 | 275 | 8 | 289 | 0.8121 |
0.8604 |
| AF-O29740-F1-model_v4 | 1 | 275 | 9 | 289 | 0.8118 |
0.8573 |
| AF-P39649-F1-model_v4 | 1 | 275 | 10 | 286 | 0.7999 |
0.854 |
| AF-P44170-F1-model_v4 | 1 | 275 | 4 | 289 | 0.7982 |
0.8471 |
| AF-O32256-F1-model_v4 | 1 | 275 | 13 | 293 | 0.7972 |
0.8605 |
| AF-Q09875-F1-model_v4 | 1 | 275 | 4 | 319 | 0.7963 |
0.8807 |
| AF-P96680-F1-model_v4 | 1 | 273 | 12 | 287 | 0.7961 |
0.8662 |
| AF-P0ABT8-F1-model_v4 | 1 | 275 | 15 | 294 | 0.7958 |
0.8532 |