PROTEIN: Rep_2224_c_105_13
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Protein File & Metadata
Source:
Rep_2224_c_105_13.pdb
Genome ID:
Protein ID:
Rep_2224_c_105_13
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Protein Sequence
MVVNYKCPNC GAPMVYDEET DTLLCEHCGT KEKVSEVNDQ EQNTVESDEQ EEPEFMSFHG 60 YKCPNCGAEI VTDDNTAATF CSFCGSPTLL EDRLSGVEKP RRIIPFKIGK EQAQEQFKKW 120 TKKGLLTPGV FSSQTVVEKI TGIYVPFWLY NYDADIELDA KATRVRHERR GDWEYTHTDH 180 FLIHRHAFTK FDNVPADASE KMNDEMMDTL EPFDYAQLKS FDMPYLSGYY AEKYNYSANE 240 MAPRVEKRVR KYGVDATMET IHGYTSVTPM RRNIRLRRTK AEYVLMPVWQ LNYTWNGKMY 300 SFMINGETGK QVGKLPTSRA KAAGWWTGIT VVCFILFTLL GV 342
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CT57-F1-model_v4 | 1 | 342 | 2 | 393 | 0.8241 |
0.8966 |
| AF-Q385J7-F1-model_v4 | 98 | 342 | 12 | 268 | 0.5398 |
0.8235 |
| AF-Q4CXP5-F1-model_v4 | 98 | 341 | 12 | 267 | 0.5382 |
0.8166 |
| AF-A4I0U5-F1-model_v4 | 98 | 342 | 12 | 265 | 0.5228 |
0.804 |
| AF-Q54L05-F1-model_v4 | 19 | 324 | 28 | 452 | 0.5116 |
0.659 |
| AF-Q4DN10-F1-model_v4 | 98 | 341 | 78 | 333 | 0.5055 |
0.8138 |
| AF-A0A077ZEQ2-F1-model_v4 | 6 | 317 | 143 | 874 | 0.5002 |
0.8039 |
| AF-A4HVV3-F1-model_v4 | 97 | 328 | 72 | 311 | 0.4545 |
0.7909 |
| AF-Q4DUW3-F1-model_v4 | 97 | 331 | 65 | 307 | 0.4535 |
0.7712 |
| AF-Q57X75-F1-model_v4 | 97 | 334 | 94 | 340 | 0.4507 |
0.7757 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O34434-F1-model_v4 | 52 | 342 | 45 | 341 | 0.7243 |
0.8606 |