PROTEIN: Rep_2208_c_20_13
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Protein File & Metadata
Source:
Rep_2208_c_20_13.pdb
Genome ID:
Protein ID:
Rep_2208_c_20_13
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Protein Sequence
MEKERKLDQF LQYTVEIGEI KFQMVDLLFI LCLSVVGLLI RIPLYPITSA DYLGCLLPWM 60 EEIRQTGGFF SLNHSISNYT SPYMYLMCLV SYVTRDNLYA LKTVSVIFDY VAALAMFLLV 120 YEITCNVRRS IIGMALVLLC PTVIINSAYW CQCDVIYTSF VLLSLLYFYR DNSRKSLVFM 180 GIAFSFKLQA LFFVPFLILM WLKGRTIKFR HFLYIPAMYV LTAVPAWLFG RSMKDLLLIY 240 VQQSETYPWG TLEYPNIYAL LGEVMPDYYH ANEVSSAGTF MTIILLGLLA YYLYGKRIII 300 TNQMAATIAL FSVALVVYTL PHMHDRYGFL VDLLAILYGV LNPGKLMMTC LFLLVSLLSY 360 IPYLLGIHIV PIAYVALGLL ALLLLVGKDL YGQIKAQESS L 401
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D6K1R5-F1-model_v4 | 4 | 401 | 15 | 514 | 0.718 |
0.8262 |
| AF-A0A0K0IZP2-F1-model_v4 | 14 | 398 | 1 | 486 | 0.7176 |
0.8393 |
| AF-A0A0J9XRE5-F1-model_v4 | 4 | 400 | 9 | 526 | 0.7151 |
0.8381 |
| AF-A0A3P7ESX3-F1-model_v4 | 13 | 398 | 5 | 507 | 0.7057 |
0.8369 |
| AF-A0A044UW34-F1-model_v4 | 9 | 397 | 16 | 526 | 0.7037 |
0.8418 |
| AF-C0NKR5-F1-model_v4 | 1 | 401 | 12 | 592 | 0.6885 |
0.8392 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-F1L090-F1-model_v4 | GT57 | 14 | 397 | 9 | 522 | 0.7106 |
0.857 |
| AF-Q5FVB1-F1-model_v4 | GT57 | 13 | 401 | 10 | 529 | 0.7094 |
0.8435 |
| A0A2R6XJJ9 | GT57 | 14 | 401 | 1 | 538 | 0.7049 |
0.8448 |
| AF-D9SBZ8-F1-model_v4 | CBM51 | 13 | 395 | 1 | 397 | 0.6815 |
0.8511 |
| AF-A0A7R8WCR0-F1-model_v4 | GT57 | 3 | 401 | 47 | 567 | 0.6772 |
0.8371 |
| I3IBU8 | CBM51 | 12 | 396 | 25 | 429 | 0.6728 |
0.8542 |
| AF-A0A6G8DGP8-F1-model_v4 | CBM51 | 6 | 399 | 1 | 396 | 0.6685 |
0.8201 |
| WGL15568.1 | CBM51 | 4 | 399 | 1 | 396 | 0.6671 |
0.8152 |
| AF-A0A5J6P2T6-F1-model_v4 | CBM51 | 21 | 396 | 47 | 451 | 0.6643 |
0.875 |
| A0A517PG10 | GT87 | 24 | 401 | 11 | 425 | 0.6638 |
0.7537 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UJR26363.1 | GT57 | 23 | 401 | 1 | 485 | 0.731 |
0.8593 |
| F1KYR5 | GT57 | 23 | 401 | 18 | 494 | 0.7228 |
0.8567 |
| F1L090 | GT57 | 14 | 397 | 9 | 522 | 0.7106 |
0.857 |
| A0A2R6XJJ9 | GT57 | 14 | 401 | 1 | 538 | 0.7049 |
0.8448 |
| Q6NRA2 | GT57 | 13 | 401 | 20 | 543 | 0.7042 |
0.8457 |
| D9SBZ8 | CBM51 | 13 | 395 | 1 | 397 | 0.6815 |
0.8511 |
| A0A7R8WCR0 | GT57 | 3 | 401 | 47 | 567 | 0.6772 |
0.8371 |
| I3IBU8 | CBM51 | 12 | 396 | 25 | 429 | 0.6728 |
0.8542 |
| WGL15568.1 | CBM51 | 4 | 399 | 1 | 396 | 0.6671 |
0.8152 |
| A0A5J6P2T6 | CBM51 | 21 | 396 | 47 | 451 | 0.6643 |
0.875 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6P8H8-F1-model_v4 | 9 | 401 | 2 | 525 | 0.7212 |
0.8453 |