PROTEIN: Rep_2126_c_11_9
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Protein File & Metadata
Source:
Rep_2126_c_11_9.pdb
Genome ID:
Protein ID:
Rep_2126_c_11_9
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Protein Sequence
MIIDKKTGEP YINIWFGNFY RPAYDDKKFV KENIALLKKL GFNSVMLDTK AWEDFKERYE 60 GKEASQFVAM HEYMQRELKN MGMSHEFLAL YLNGDNLYPN IRFSPPIYGE SVIDKDGNDG 120 KWYRYWSDKA KASMEEHVAR VLESYGENYV TVTVNGRERK PICSMWDPIV APSFDEEGRK 180 RYLHWLENEY QGDIGLFNRA YGVEKTSFDT LEKEDYWFEC RYPDCLTFSE EDVRNQTPKA 240 RMLMDNRKWQ CEELCLYFQD MKERLHRIDE SLYLCPDMAQ WGYFLNVDGS MLAGVGFADL 300 WDTAARGIDI YRLAEYVDCA HFLSVPVTPD GNPEAYVTSC HHSMMRSMNS GREFIGGIYW 360 GRYLYNDIYT VLTPCEIVAS IVASGASGYT SYGMCGLDDG GLLHRMEGYF NDSLGRANEW 420 AKEVIPQLGA KKKSDIAILF PSAMAAYETM RTEGNKERRL DLLGWYKACR DLGAEADVTD 480 SKNLCKEHFL DSYRVLIIPD NDCYEMNPDP EFEETLRAWC EHGGIVLYGP DSALAKNCFG 540 VEAYRHQPDA IRYQEAGMVK SRNFCTYSGG KCVAAYLSDG ASCVTQYQTE NGYQYAFGFS 600 YGYAYNTKFI PHVPVEQKNN ELYPLEMMKG NILADILKDT AGMETKLQKN IERAYFANGQ 660 IIINHTSYPF YVEQEGEKQY QYPVNETLLL PHSAVFVKSD NHEIEMPKHN SQ 712
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GP41-F1-model_v4 | 1 | 704 | 5 | 685 | 0.7585 |
0.7911 |
| AF-Q55EN4-F1-model_v4 | 1 | 705 | 134 | 959 | 0.5487 |
0.6415 |
| AF-Q9SYS1-F1-model_v4 | 3 | 693 | 3 | 488 | 0.5421 |
0.6535 |
| AF-P55005-F1-model_v4 | 3 | 693 | 3 | 488 | 0.5416 |
0.6523 |
| AF-Q8L762-F1-model_v4 | 3 | 701 | 71 | 577 | 0.5174 |
0.6508 |
| AF-A0A0R0GWB3-F1-model_v4 | 1 | 691 | 69 | 570 | 0.5079 |
0.6436 |
| AF-C0P5G0-F1-model_v4 | 3 | 669 | 80 | 579 | 0.4956 |
0.6412 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6F8Y4E0-F1-model_v4 | GH42 | 3 | 700 | 1 | 678 | 0.7655 |
0.7965 |
| AF-H8NTQ2-F1-model_v4 | GH42 | 1 | 705 | 5 | 689 | 0.7649 |
0.7953 |
| AF-A0A0H3FDX5-F1-model_v4 | GH42 | 1 | 705 | 5 | 689 | 0.7648 |
0.7952 |
| AF-A0A2L1UM39-F1-model_v4 | GH42 | 1 | 704 | 5 | 687 | 0.7641 |
0.7955 |
| AF-A0A3G4Z2Z5-F1-model_v4 | GH42 | 1 | 701 | 4 | 681 | 0.7622 |
0.7963 |
| AF-A0A127EEM3-F1-model_v4 | GH42 | 1 | 699 | 5 | 688 | 0.76 |
0.7908 |
| AF-H1AD38-F1-model_v4 | GH42 | 1 | 705 | 6 | 690 | 0.7592 |
0.7901 |
| AF-A0A0T6BVY2-F1-model_v4 | GH42 | 1 | 707 | 6 | 691 | 0.7591 |
0.7896 |
| AF-A0A6I7FA23-F1-model_v4 | GH42 | 1 | 705 | 6 | 690 | 0.7585 |
0.7895 |
| AF-A0A222WLJ9-F1-model_v4 | GH42 | 1 | 705 | 10 | 695 | 0.7572 |
0.7894 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7T3RF75 | GH42 | 1 | 701 | 1 | 679 | 0.7696 |
0.8011 |
| A8SWS9 | GH42 | 1 | 705 | 4 | 680 | 0.7656 |
0.7997 |
| A0A6F8Y4E0 | GH42 | 3 | 700 | 1 | 678 | 0.7655 |
0.7965 |
| A0A4P6EP31 | GH42 | 1 | 702 | 1 | 684 | 0.7646 |
0.7934 |
| UJF16098.1 | GH42 | 1 | 704 | 3 | 671 | 0.7643 |
0.8027 |
| A0A2K9HI10 | GH42 | 5 | 702 | 5 | 672 | 0.7635 |
0.8031 |
| UKS28014.1 | GH42 | 2 | 703 | 1 | 703 | 0.7635 |
0.7828 |
| B5YCK5 | GH42 | 1 | 699 | 1 | 683 | 0.7621 |
0.7918 |
| A0A0R1QBN7 | GH42 | 1 | 701 | 2 | 677 | 0.7617 |
0.7959 |
| D9SM34 | GH42 | 10 | 701 | 1 | 659 | 0.7615 |
0.8037 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4uzs-assembly1.cif.gz_C | 1 | 699 | 6 | 683 | 0.7656 |
0.7999 |
| 4uzs-assembly1.cif.gz_B | 1 | 699 | 6 | 679 | 0.7649 |
0.8014 |
| 4ucf-assembly1.cif.gz_C | 1 | 699 | 7 | 684 | 0.7631 |
0.7981 |
| 4ucf-assembly1.cif.gz_B | 1 | 699 | 6 | 686 | 0.7628 |
0.7954 |
| 8ibt-assembly1.cif.gz_A | 1 | 704 | 8 | 694 | 0.7623 |
0.7929 |
| 3tts-assembly1.cif.gz_A | 1 | 701 | 1 | 675 | 0.7615 |
0.7955 |
| 5e9a-assembly1.cif.gz_A | 1 | 704 | 4 | 679 | 0.7612 |
0.7958 |
| 4ucf-assembly1.cif.gz_A | 1 | 699 | 6 | 682 | 0.7606 |
0.7954 |
| 4oif-assembly1.cif.gz_C | 1 | 701 | 5 | 684 | 0.7593 |
0.7927 |
| 8ibr-assembly1.cif.gz_A | 1 | 699 | 8 | 691 | 0.7585 |
0.7905 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C6H178-F1-model_v4 | 1 | 699 | 1 | 667 | 0.7661 |
0.8046 |
| AF-Q5FJ41-F1-model_v4 | 1 | 699 | 1 | 667 | 0.7657 |
0.8042 |
| AF-Q09HN2-F1-model_v4 | 1 | 700 | 1 | 676 | 0.7655 |
0.7986 |
| AF-Q9KI47-F1-model_v4 | 1 | 700 | 1 | 677 | 0.7649 |
0.7976 |
| AF-C8WV58-F1-model_v4 | 1 | 707 | 5 | 688 | 0.7637 |
0.7944 |
| AF-D9SM34-F1-model_v4 | 10 | 701 | 1 | 659 | 0.7616 |
0.8037 |
| AF-D4QFE7-F1-model_v4 | 1 | 699 | 9 | 689 | 0.7615 |
0.7957 |
| AF-D5JGG0-F1-model_v4 | 1 | 703 | 1 | 665 | 0.7611 |
0.8002 |
| AF-Q0TUR6-F1-model_v4 | 1 | 700 | 5 | 689 | 0.7598 |
0.7902 |
| AF-Q93GI5-F1-model_v4 | 1 | 699 | 8 | 691 | 0.7595 |
0.7914 |