PROTEIN: Rep_2060_c_7_55
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Protein File & Metadata
Source:
Rep_2060_c_7_55.pdb
Genome ID:
Protein ID:
Rep_2060_c_7_55
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Protein Sequence
MYKATPEEMK NLVDSLLVSY QKHPVICNID CTNRLNRSMT IEILEMIRFV LFPGYFELKN 60 LKGSSIEYHV GELLENIQYK LKKQVAKALQ HEQITGELTA DVAEARAEEI VSQFLKKLPE 120 LRDILATDVQ AAYDGDPAAY NTDEIIFSYP GVYAVTINRI AHELHVLGVP LIPRMMTEYA 180 HNLTGIDIHP GATIGRNFFI DHGTGVVIGE TTIIGDNVKI YQGVTLGALS TRGGQSLKNK 240 KRHPTLEDNV TVYSGASILG GETVIGTGAV IGSNAFLTSS VPAHTRVSIK NPELQFKDRS 300 SVRTAEIGQE GFFNRVEQD 319
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4DJX5-F1-model_v4 | 1 | 298 | 1 | 337 | 0.7827 |
0.8839 |
| AF-Q4D6P5-F1-model_v4 | 1 | 295 | 1 | 334 | 0.7809 |
0.882 |
| AF-A4IA64-F1-model_v4 | 5 | 296 | 1 | 397 | 0.7232 |
0.8947 |
| AF-P71405-F1-model_v4 | 120 | 290 | 1 | 162 | 0.7043 |
0.9758 |
| AF-A0A132Z2H2-F1-model_v4 | 122 | 290 | 1 | 162 | 0.6839 |
0.9716 |
| AF-A0A077ZMK0-F1-model_v4 | 122 | 290 | 1 | 162 | 0.6811 |
0.9645 |
| AF-Q9I210-F1-model_v4 | 41 | 298 | 2 | 209 | 0.673 |
0.8728 |
| AF-Q2G2M7-F1-model_v4 | 119 | 294 | 1 | 186 | 0.6314 |
0.9251 |
| AF-Q0PAC7-F1-model_v4 | 119 | 290 | 1 | 166 | 0.6244 |
0.9614 |
| AF-Q8DQS9-F1-model_v4 | 122 | 290 | 1 | 162 | 0.6227 |
0.9631 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A447LR74-F1-model_v4 | GT2 | 51 | 290 | 16 | 227 | 0.5367 |
0.6911 |
| AF-A0A0K1Q0U6-F1-model_v4 | GT2 | 83 | 304 | 261 | 552 | 0.4253 |
0.7635 |
| AF-A0A250IU01-F1-model_v4 | GT2 | 80 | 290 | 265 | 521 | 0.4229 |
0.7785 |
| AF-A0A250IFU7-F1-model_v4 | GT2 | 68 | 290 | 254 | 520 | 0.4073 |
0.7169 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A447LR74 | GT2 | 51 | 290 | 16 | 227 | 0.5367 |
0.6911 |
| A0A0K1Q0U6 | GT2 | 83 | 304 | 261 | 552 | 0.4253 |
0.7635 |
| A0A250IU01 | GT2 | 80 | 290 | 265 | 521 | 0.4229 |
0.7785 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6lcn-assembly1.cif.gz_E | 3 | 302 | 1 | 294 | 0.8981 |
0.9453 |
| 6lcn-assembly1.cif.gz_C | 5 | 302 | 1 | 294 | 0.8962 |
0.9424 |
| 6lcn-assembly1.cif.gz_A | 3 | 299 | 1 | 296 | 0.894 |
0.9377 |
| 6lcn-assembly1.cif.gz_B | 1 | 302 | 7 | 306 | 0.8833 |
0.9304 |
| 6lcn-assembly1.cif.gz_F | 1 | 302 | 13 | 309 | 0.8784 |
0.9387 |
| 3f1x-assembly1.cif.gz_A | 3 | 293 | 3 | 276 | 0.8667 |
0.9468 |
| 3p1b-assembly1.cif.gz_A | 40 | 289 | 35 | 266 | 0.7524 |
0.9465 |
| 3p47-assembly1.cif.gz_A-2 | 40 | 289 | 36 | 270 | 0.7489 |
0.9378 |
| 7bw9-assembly1.cif.gz_B | 41 | 298 | 35 | 267 | 0.7464 |
0.954 |
| 7bw9-assembly1.cif.gz_A | 41 | 298 | 35 | 269 | 0.7442 |
0.9504 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q59967-F1-model_v4 | 1 | 297 | 12 | 313 | 0.8596 |
0.9337 |
| AF-Q9ZK14-F1-model_v4 | 120 | 290 | 1 | 162 | 0.7045 |
0.9762 |
| AF-P71405-F1-model_v4 | 120 | 290 | 1 | 162 | 0.7043 |
0.9758 |
| AF-Q6GBV9-F1-model_v4 | 119 | 294 | 1 | 185 | 0.6345 |
0.9304 |
| AF-Q6GJE0-F1-model_v4 | 119 | 294 | 1 | 185 | 0.6319 |
0.9265 |
| AF-P77985-F1-model_v4 | 118 | 294 | 1 | 187 | 0.6311 |
0.9225 |
| AF-P67764-F1-model_v4 | 121 | 294 | 1 | 183 | 0.6311 |
0.9308 |
| AF-Q8CTU2-F1-model_v4 | 121 | 294 | 1 | 184 | 0.6298 |
0.9288 |
| AF-Q5HIE6-F1-model_v4 | 121 | 294 | 1 | 184 | 0.6289 |
0.9273 |
| AF-P67765-F1-model_v4 | 121 | 293 | 1 | 183 | 0.6287 |
0.9326 |