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PROTEIN: Rep_2060_c_26_34

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Protein File & Metadata
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Source:
Rep_2060_c_26_34.pdb
Genome ID:
Rep_2060
Protein ID:
Rep_2060_c_26_34

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKNFKNQVA   LGLAAVLAAS   ALAGCGGSDG   KTTEASKTEG   TQAEAGTGDT   AGGEAASGET 60
TGTGENGDRM   TITVMGIDWG   YGPLANSEME   QYWEDLFDVN   LEIEWVNYQD   FDQKVNTLIA 120
ANSMPDVIQV   SKQGNGSYYY   PVFTQAVDAG   SFVDMTPYLF   DNGKGIAETN   AVMKNWDESM 180
WDQARYNGGI   YILPRSKAES   GQNSGIEVRK   DLMEKYNFTE   EPKTMDELKT   WLIDLSKAAT 240
EGEGKKIYAL   EYFDDDFMED   RIKAFAVAFT   GQSDWSVNEN   GEFEYMQFKD   EYINFLNWMK 300
DLYDAGAIDP   EFALANADTS   KWKAGNSVAY   LTAWYNWNQS   ADLTSNKIFD   ESTGPELKAW 360
CLMPVKGDKA   YTVSPNYTDI   DSCIAISAKC   SDEKIKKIME   VFNATEETYP   GYDSVMMDGV 420
QDIHYTLKED   GTKNTDDEVF   KKKRQDGYVG   AWNQIFLKKD   ADQITDKFMK   DGTKRASDEN 480
IARVEEIKEF   VYSDLKETGM   KNAISNLQSA   TYNNNWNVLT   DDVNTLCAQY   VMGQIGETEW 540
KTFVQGIVDS   ADYKAIQQEF   KDAAAKAAK 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 25 569 6 502 0.7809 0.85
AF-A0A133D019-F1-model_v4 67 569 35 485 0.665 0.7827
AF-A0A132ZDH4-F1-model_v4 63 553 24 427 0.6264 0.7659
AF-A0A133CSA1-F1-model_v4 67 556 26 427 0.6261 0.7687
AF-Q7AQ51-F1-model_v4 22 560 6 445 0.6236 0.7215
AF-Q9CBN6-F1-model_v4 64 560 33 446 0.6165 0.7517
AF-K0F8J3-F1-model_v4 67 560 27 435 0.6155 0.7521
AF-A0A133CPC5-F1-model_v4 64 556 29 423 0.6066 0.7534
AF-A0A0H3GX53-F1-model_v4 65 563 19 428 0.5966 0.7224
AF-A0A133CKQ7-F1-model_v4 66 560 35 419 0.5932 0.7492
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 68 569 44 506 0.6954 0.8145
AF-K8EJG7-F1-model_v4 CBM50 , CE4 67 559 31 417 0.5911 0.7424
A0A9Q8PNJ5 GH4 14 559 258 866 0.4953 0.6254
AF-A0A1Q2TKJ3-F1-model_v4 GH49 14 560 23 797 0.4827 0.5904
UJP10085.1 GH154 1 534 144 1168 0.3359 0.5075
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 68 569 44 506 0.6954 0.8145
K8EJG7 CBM50 , CE4 67 559 31 417 0.5911 0.7424
A0A9Q8PNJ5 GH4 14 559 258 866 0.4953 0.6254
A0A1Q2TKJ3 GH49 14 560 23 797 0.4827 0.5904
A0A7U1BNH7 GH10 65 565 25 744 0.4817 0.6187
UJP10085.1 GH154 1 534 144 1168 0.3359 0.5075
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 67 569 1 496 0.7217 0.786
3omb-assembly1.cif.gz_A 65 569 3 503 0.721 0.7833
5suo-assembly1.cif.gz_A 69 569 1 450 0.6901 0.7862
5g5y-assembly1.cif.gz_A 67 569 1 492 0.6879 0.7572
5xs8-assembly1.cif.gz_A 66 568 1 474 0.6821 0.7619
4tqu-assembly1.cif.gz_Q 60 569 1 489 0.6691 0.7401
7c6x-assembly7.cif.gz_G 71 563 1 416 0.6573 0.7737
7c6z-assembly1.cif.gz_A 70 559 1 415 0.6558 0.7728
7c71-assembly2.cif.gz_B 70 559 1 415 0.6542 0.7707
3u1o-assembly2.cif.gz_B 67 563 2 407 0.6539 0.7771
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 67 568 33 502 0.7625 0.8743
AF-Q795R2-F1-model_v4 67 568 38 498 0.7576 0.881
AF-A0A0H2URD6-F1-model_v4 65 569 42 536 0.6663 0.7568
AF-Q8FVS7-F1-model_v4 65 559 20 411 0.6481 0.7978
AF-Q578M8-F1-model_v4 65 559 20 411 0.6469 0.7965
AF-O31518-F1-model_v4 68 559 31 427 0.6384 0.7911
AF-P76042-F1-model_v4 67 559 25 430 0.6286 0.7675
AF-Q9RUE8-F1-model_v4 64 560 15 420 0.6113 0.7379
AF-Q00749-F1-model_v4 63 558 29 420 0.611 0.7612
AF-Q7LYW7-F1-model_v4 65 562 39 450 0.6098 0.7512
Download Full SwissProt Results