PROTEIN: Rep_2060_c_139_9
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Protein File & Metadata
Source:
Rep_2060_c_139_9.pdb
Genome ID:
Protein ID:
Rep_2060_c_139_9
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Protein Sequence
MNSVVGYKRK LRHQIGSKSK KVSLYSLSIF LVISIFFIPD YIGFSVFNCQ RVTLLLIWYM 60 ILRNPNRIKE FKNVIFSFRG NAFVLIYLII LLYTAVYRRN LNTFFNPFFD QLAVLYTMIY 120 LFKVELSVEK FLNLLIRIAY VLCIMGILEF LLKGSVFLQF EMIPGMVVGD SFRNGQYRIM 180 GPAHHPLGYG LYLLIMTPLV CFHYRKRAIS LFSHFWLFML IAVNVYLTGS RSTLGLFLLE 240 IFLIFLVSSR KEKLPVLLIA FYTLITSIIV IMLFYNTSAV QSVLISIAHL VDAALNTKFA 300 ESLGVDTTTY VLSEDYRKLL PLIFSLDWIN PLIGRGYGYT FNWAYQGFWI SSIDNYYVNQ 360 YIKVAYPGLI IQLLLYGFFL IKCFRSALCR GSRLAVALSI CFVLYFVSLW WVDVLGTLDY 420 IFVLFALLYA MDEKYTMVKY KELLE 445
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G288-F1-model_v4 | 20 | 444 | 6 | 412 | 0.7383 |
0.796 |
| AF-A0A0H3H4H7-F1-model_v4 | 14 | 439 | 5 | 389 | 0.7282 |
0.8038 |
| AF-Q9I1M9-F1-model_v4 | 19 | 440 | 35 | 457 | 0.7025 |
0.7821 |
| AF-Q9HUG6-F1-model_v4 | 21 | 445 | 16 | 398 | 0.7005 |
0.7883 |
| AF-X8F0V5-F1-model_v4 | 18 | 441 | 38 | 463 | 0.6607 |
0.7358 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 18 | 445 | 13 | 454 | 0.5775 |
0.7569 |
| AF-B8DZR6-F1-model_v4 | GT9 | 16 | 445 | 36 | 477 | 0.5733 |
0.7588 |
| AF-B5YD26-F1-model_v4 | GT9 | 17 | 445 | 37 | 477 | 0.571 |
0.7575 |
| AF-D5MJ04-F1-model_v4 | GT9 | 14 | 445 | 16 | 560 | 0.5647 |
0.7409 |
| AF-H8L3P3-F1-model_v4 | GT2 | 20 | 445 | 14 | 672 | 0.5455 |
0.7166 |
| AF-B8G860-F1-model_v4 | GH39 | 8 | 442 | 543 | 1022 | 0.5282 |
0.7543 |
| A0A9Q9IL13 | GT4 | 3 | 445 | 1 | 889 | 0.5247 |
0.7181 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 10 | 439 | 577 | 1041 | 0.5198 |
0.7561 |
| AF-A9WHX8-F1-model_v4 | GH39 | 8 | 444 | 609 | 1083 | 0.5153 |
0.7455 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D2IX70 | GT1 | 19 | 438 | 27 | 501 | 0.5863 |
0.6702 |
| A0A517MXC4 | GT26 | 18 | 445 | 13 | 454 | 0.5775 |
0.7569 |
| B5YD26 | GT9 | 17 | 445 | 37 | 477 | 0.571 |
0.7575 |
| B8IGI7 | GH16_7 | 19 | 445 | 16 | 463 | 0.5674 |
0.7756 |
| D5MJ04 | GT9 | 14 | 445 | 16 | 560 | 0.5647 |
0.7409 |
| H8L3P3 | GT2 | 20 | 445 | 14 | 672 | 0.5455 |
0.7166 |
| A0A9Q9IL13 | GT4 | 3 | 445 | 1 | 889 | 0.5247 |
0.7181 |
| A0A160T1R3 | GH39 | 10 | 439 | 577 | 1041 | 0.5198 |
0.7561 |
| A9WHX8 | GH39 | 8 | 444 | 609 | 1083 | 0.5153 |
0.7455 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 22 | 438 | 6 | 403 | 0.655 |
0.7151 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00474-F1-model_v4 | 41 | 434 | 4 | 391 | 0.7099 |
0.7857 |
| AF-Q9HUG6-F1-model_v4 | 21 | 445 | 16 | 398 | 0.7005 |
0.7883 |
| AF-O32270-F1-model_v4 | 17 | 445 | 50 | 486 | 0.6613 |
0.7313 |