dbCAN Logo

PROTEIN: Rep_2060_c_10_43

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_2060_c_10_43.pdb
Genome ID:
Rep_2060
Protein ID:
Rep_2060_c_10_43

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MGNRILLLGV   YGMEMVECGG   VLCKNARNGG   VSHASIMFAG   EKMREGLEKA   SEILNTSIEY 60
LGMDSGELSG   TLEEKLQIVK   VIRSFRPDII   ITQDPEHCVS   DLDPGRRPAM   TVLLEGIALA 120
GRAYALDKLP   GLEPCRCNNI   YYMTPENPNC   LVDIFDVWDE   KCQAMDSLES   QILFIGELTS 180
EEKKAQYAKF   IPGLNGLQSP   LEQGTQMKRL   MDTAYHLYQG   STGHNDVFLS   ECYRKEGMFV 240
LEELF 245
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F468-F1-model_v4 1 242 7 237 0.7732 0.8251
AF-A0A0H3GYX3-F1-model_v4 1 245 5 246 0.7533 0.7811
AF-Q8DPX3-F1-model_v4 1 240 9 213 0.7238 0.8253
AF-K0EZW5-F1-model_v4 1 243 8 214 0.7209 0.8175
AF-K0EXB0-F1-model_v4 1 243 8 214 0.718 0.8146
AF-P9WJN1-F1-model_v4 1 245 1 280 0.6705 0.7389
AF-Q7APV3-F1-model_v4 1 245 1 280 0.6695 0.7395
AF-K0FCF4-F1-model_v4 1 245 2 282 0.6674 0.7419
AF-K0F676-F1-model_v4 2 244 1 260 0.6477 0.6908
AF-Q54C64-F1-model_v4 1 238 14 258 0.6129 0.6672
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C4L6P6-F1-model_v4 CE14 3 245 1 227 0.8022 0.8505
AF-A0A7G9W6V1-F1-model_v4 CE14 3 245 2 228 0.8019 0.8571
AF-U5YS25-F1-model_v4 CE14 1 238 9 243 0.8008 0.8484
AF-A0A7T4YF50-F1-model_v4 CE14 2 245 1 223 0.8005 0.8648
AF-A0A517YRY6-F1-model_v4 CE14 2 245 1 223 0.798 0.8625
AF-D1C7T5-F1-model_v4 CE14 1 239 3 230 0.798 0.8474
AF-A0A6C0UGC1-F1-model_v4 CE14 3 242 1 230 0.7965 0.8425
AF-D1CFY3-F1-model_v4 CE14 1 240 7 231 0.7963 0.8563
AF-A0A3Q9RKY4-F1-model_v4 CE14 3 245 5 232 0.7956 0.8508
AF-D6YU39-F1-model_v4 CE14 3 245 2 219 0.7956 0.8758
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
C4L6P6 CE14 3 245 1 227 0.8022 0.8505
A0A7G9W6V1 CE14 3 245 2 228 0.8019 0.8571
U5YS25 CE14 1 238 9 243 0.8008 0.8484
D1CFY3 CE14 1 240 7 231 0.7963 0.8563
D6YU39 CE14 3 245 2 219 0.7956 0.8758
B9L038 CE14 1 240 7 233 0.7926 0.8504
A7NIE2 CE14 1 238 3 227 0.792 0.846
A0A455SD27 CE14 1 238 4 226 0.7892 0.8481
A0A0G3V2T0 CE14 1 240 7 238 0.7876 0.8351
A0A455T5Y8 CE14 1 240 12 238 0.7859 0.8512
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6p2t-assembly1.cif.gz_A 3 245 2 230 0.7956 0.8455
2ixd-assembly1.cif.gz_A 3 245 3 229 0.7858 0.8424
1uan-assembly1.cif.gz_A 3 245 2 217 0.7851 0.8608
1uan-assembly1.cif.gz_B 3 245 2 216 0.785 0.8623
5bmo-assembly1.cif.gz_A 1 237 7 240 0.7787 0.8255
5cgz-assembly1.cif.gz_A 2 245 1 240 0.7607 0.7859
4xm0-assembly1.cif.gz_C 1 239 24 251 0.7372 0.8325
8bgo-assembly1.cif.gz_C 1 239 34 260 0.73 0.8407
3we7-assembly1.cif.gz_A 1 239 29 256 0.7267 0.8283
4ewl-assembly2.cif.gz_A 1 245 3 285 0.6469 0.725
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q81FP2-F1-model_v4 3 245 4 230 0.7881 0.8476
AF-Q6F4N1-F1-model_v4 1 238 30 257 0.7415 0.8436
AF-Q88JX8-F1-model_v4 1 245 17 258 0.7381 0.7821
AF-Q81AU5-F1-model_v4 1 238 1 219 0.6993 0.7584
AF-O31857-F1-model_v4 1 238 1 219 0.6949 0.7553
AF-A0R2W9-F1-model_v4 1 245 1 280 0.6728 0.7408
AF-P9WJN0-F1-model_v4 1 245 1 280 0.6705 0.7388
AF-P9WJN1-F1-model_v4 1 245 1 280 0.6705 0.7389
AF-Q9ADK0-F1-model_v4 1 245 2 282 0.6683 0.742
AF-C1AZH2-F1-model_v4 1 245 2 279 0.6622 0.7336
Download Full SwissProt Results