PROTEIN: Rep_1975_c_1_12
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Protein File & Metadata
Source:
Rep_1975_c_1_12.pdb
Genome ID:
Protein ID:
Rep_1975_c_1_12
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Protein Sequence
MSKKQGKNGN AKMQTKSDYL FSMSYAPKID ESVHWLQLLP IAFFGAFVII IVKMYSYSRN 60 MEQFYWSSGN SNLTDFFSYY KMVAILICAV LTLVLLLYRL CTQSLSIKRC FAYIPMIIYS 120 VMVLVSYLLS DYKEFSLLGY NDRFEGTLTL LAYMVMLFFI INTINTESGI KWAVYPIAVS 180 SALLGILGIS QATGHDFFRS SIGQKLVTPN TSVQMTETFL NGRVGSALNE AGLITQDSYT 240 TNELIDMCKS IDIDFLGFTF NNNEIYQTVY NINYVSFYLT LLLPLFGMLF IRSVLRGKEE 300 PVWKKFIWGA LFALLVFNLI GSASSGGWLG MGFVVLAALI VLNKKVIKWW KPVVILLVLT 360 IAIGGVTYNR WIGELTGAIN STLGKTDAGG QSAESAGNAG DTESGNAHAI ASDAHKLQYI 420 DTDGNDIIIG IDDNTLTITT YPEDTNAVRI LDQNGQSIGL VPTDTNRVLA FDDERFAHCY 480 FQAASDELGN DYFIFTSDDQ ETKWTFRITD DGVFYFNNLG NLVDLDKVPS VGWENNSSWG 540 NGRGYIFSRT IPMMKDTAFI GHGADTYCIY FPHKDYVGKY NSASFANNIN IIVDKPHNMY 600 MGAWIGTGGI SVLALFAMFG IYIVQSFRLY FRSKFNPDDF VSFVGAGIFF GVFGFLFSAL 660 VDDSTVSVMP MFYTLLGTGI AANMMIKRRS ADEKQVSLK 699
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 32 | 699 | 20 | 457 | 0.4862 |
0.78 |
| UII34295.1 | GT4 | 25 | 699 | 10 | 457 | 0.4831 |
0.7798 |
| AF-D5MJ04-F1-model_v4 | GT9 | 25 | 699 | 17 | 566 | 0.4796 |
0.6376 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 32 | 699 | 20 | 457 | 0.4862 |
0.78 |
| UII34295.1 | GT4 | 25 | 699 | 10 | 457 | 0.4831 |
0.7798 |
| D5MJ04 | GT9 | 25 | 699 | 17 | 566 | 0.4796 |
0.6376 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O32270-F1-model_v4 | 32 | 699 | 59 | 488 | 0.5994 |
0.8005 |