PROTEIN: Rep_1869_c_6_13
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Protein File & Metadata
Source:
Rep_1869_c_6_13.pdb
Genome ID:
Protein ID:
Rep_1869_c_6_13
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Protein Sequence
MKKFLTLLFT VILFSFSALA FAGSHQQAAA DASSVNRDTR SFSERLTERL NGGEKAEIKS 60 ARQTAKLENM PKVAVMYINN SQTTYNNDID QSILKNLAKA VDCNTYQYID GKTYIDSLNK 120 IGIADITTAE RADIINVFKG DDIDYAIFLQ VDPFIRKDKV TIFTVGKEMT AIVPFKIIDV 180 KNNRYIYNGK FTEMAEDGSV FGDVGSKSVA LKALEKVNEK AASIIDTRLP KTKDAAHK 238
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P7V0-F1-model_v4 | 64 | 232 | 72 | 255 | 0.4855 |
0.7037 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q1D1E9-F1-model_v4 | CBM20 , GH13 | 67 | 238 | 35 | 726 | 0.3335 |
0.6816 |
| AF-A0A4Y6D315-F1-model_v4 | CBM20 , GH13 | 67 | 238 | 35 | 196 | 0.3325 |
0.7191 |
| AF-L7UH56-F1-model_v4 | CBM20 , GH13 | 67 | 237 | 30 | 192 | 0.3303 |
0.7119 |
| AF-A0A250K1G2-F1-model_v4 | CBM20 , GH13 | 68 | 238 | 35 | 763 | 0.3301 |
0.6786 |
| AF-A0A0H4WSU2-F1-model_v4 | CBM20 , GH13 | 66 | 238 | 34 | 379 | 0.3267 |
0.6639 |
| AKF82971.1 | CBM20 , GH13 | 66 | 238 | 22 | 488 | 0.3208 |
0.6621 |
| AF-A0A4Y6CES3-F1-model_v4 | CBM20 , GH13 | 67 | 238 | 35 | 788 | 0.3196 |
0.6545 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5B8XYL6 | GH13 | 4 | 238 | 7 | 162 | 0.3218 |
0.6993 |
| AKF82971.1 | CBM20 , GH13 | 66 | 238 | 22 | 488 | 0.3208 |
0.6621 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6uxc-assembly1.cif.gz_A | 70 | 237 | 1 | 163 | 0.5807 |
0.7135 |
| 6uxc-assembly2.cif.gz_B | 69 | 235 | 1 | 172 | 0.5801 |
0.7152 |
| 3bgh-assembly1.cif.gz_B | 66 | 238 | 13 | 186 | 0.5785 |
0.7157 |
| 3w1e-assembly1.cif.gz_A | 68 | 235 | 96 | 269 | 0.4256 |
0.7014 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67313-F1-model_v4 | 68 | 230 | 28 | 190 | 0.5118 |
0.6731 |
| AF-O83691-F1-model_v4 | 13 | 229 | 19 | 440 | 0.3797 |
0.543 |