PROTEIN: Rep_180_c_146_16
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_180_c_146_16.pdb
Genome ID:
Protein ID:
Rep_180_c_146_16
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSDNFNKNRL AKNTIFLYVR MLFTMWLNLY ATRLTLANLG VDDMGVYGVV GSIVSMFAVF 60 SGGIGSATQR FLTYEIGRDG GDANKVFCSC LNVIFILSFV IFIMLEVGGL WFLNHKINIP 120 AESMEAAQWV FQLSVLTCIV NLISIPYNSL ITAHEKMDAF AVISIMQVIL TCASAYCLSY 180 FKNDRLLIYA IMMAAISLLI RITYQIYCHR KFKEARYQMI LDWGQIKQIG KFAGISSTSG 240 FLQIISNQGL VIVINLTFGV AINAVYTIAL QLKNAVLSFA QNIQRAVAPQ ITKTYANGEI 300 EAHKRLVYSG SKIQVFLIYF IMFPFLFRTE YIMHLWLGEV PPYAITYVQC TIFLSLAYAS 360 FETIRTAVYA TGNIARFMIL PELTYLLVLP ITYCTGVLTK NPNALIASAV IYEIIVCVIR 420 VWLATKVSIV RFRAIFSLVI RPCLLVALIS LISCYVLKSL TSPDLLGLVL FLIASSIILA 480 IAIFVLGLNN SERNIVKTFL RKKRFNI 507
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PAP8-F1-model_v4 | 1 | 430 | 1 | 434 | 0.8137 |
0.9013 |
| AF-Q8CWT9-F1-model_v4 | 3 | 504 | 1 | 469 | 0.8075 |
0.8567 |
| AF-Q8DPQ6-F1-model_v4 | 1 | 431 | 3 | 445 | 0.801 |
0.9004 |
| AF-O25454-F1-model_v4 | 24 | 430 | 1 | 412 | 0.8008 |
0.9104 |
| AF-P71616-F1-model_v4 | 1 | 431 | 3 | 435 | 0.8 |
0.8856 |
| AF-Q32FA7-F1-model_v4 | 2 | 431 | 2 | 447 | 0.798 |
0.9023 |
| AF-Q8ZPP2-F1-model_v4 | 2 | 431 | 2 | 447 | 0.7975 |
0.9012 |
| AF-P37340-F1-model_v4 | 3 | 431 | 3 | 447 | 0.7971 |
0.9033 |
| AF-Q8DNG1-F1-model_v4 | 1 | 491 | 8 | 454 | 0.7964 |
0.8682 |
| AF-A0A0H3GGV5-F1-model_v4 | 3 | 431 | 3 | 434 | 0.7954 |
0.8837 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 501 | 1 | 509 | 0.6919 |
0.733 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 499 | 36 | 545 | 0.6508 |
0.709 |
| AF-F2NKF2-F1-model_v4 | GT4 | 4 | 501 | 1 | 592 | 0.6371 |
0.8361 |
| QJC17489.1 | GT2 | 1 | 507 | 215 | 847 | 0.6293 |
0.7948 |
| WBL35586.1 | GT4 | 1 | 507 | 202 | 803 | 0.6261 |
0.7742 |
| QNU38870.1 | GT4 | 5 | 506 | 1 | 482 | 0.6205 |
0.7235 |
| A0A9W6NQN0 | GT2 | 1 | 430 | 15 | 420 | 0.6002 |
0.8617 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 507 | 2 | 758 | 0.5776 |
0.7382 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 9 | 507 | 1 | 570 | 0.577 |
0.7357 |
| AF-D7BDH0-F1-model_v4 | GT4 | 4 | 498 | 1 | 521 | 0.5745 |
0.7551 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 501 | 1 | 509 | 0.6919 |
0.733 |
| A0A160T2N7 | GT28 | 1 | 499 | 36 | 545 | 0.6508 |
0.709 |
| F2NKF2 | GT4 | 4 | 501 | 1 | 592 | 0.6371 |
0.8361 |
| QJC17489.1 | GT2 | 1 | 507 | 215 | 847 | 0.6293 |
0.7948 |
| WBL35586.1 | GT4 | 1 | 507 | 202 | 803 | 0.6261 |
0.7742 |
| QNU38870.1 | GT4 | 5 | 506 | 1 | 482 | 0.6205 |
0.7235 |
| A0A9W6NQN0 | GT2 | 1 | 430 | 15 | 420 | 0.6002 |
0.8617 |
| A0A517Z2I8 | GT2 | 1 | 507 | 2 | 758 | 0.5776 |
0.7382 |
| A0A2U8PPB3 | GT4 | 9 | 507 | 1 | 570 | 0.577 |
0.7357 |
| D7BDH0 | GT4 | 4 | 498 | 1 | 521 | 0.5745 |
0.7551 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fv8-assembly1.cif.gz_B | 1 | 431 | 3 | 435 | 0.8001 |
0.8833 |
| 6ids-assembly1.cif.gz_A | 2 | 431 | 2 | 433 | 0.7951 |
0.8824 |
| 6z70-assembly1.cif.gz_A | 1 | 434 | 2 | 444 | 0.795 |
0.8804 |
| 3vvo-assembly1.cif.gz_A | 1 | 431 | 7 | 442 | 0.7925 |
0.8866 |
| 6fv6-assembly1.cif.gz_A | 4 | 431 | 1 | 405 | 0.7913 |
0.8939 |
| 6idr-assembly1.cif.gz_A | 2 | 431 | 2 | 433 | 0.7908 |
0.878 |
| 6z71-assembly1.cif.gz_A | 1 | 431 | 1 | 418 | 0.7907 |
0.8816 |
| 3w4t-assembly1.cif.gz_A | 1 | 431 | 7 | 443 | 0.7898 |
0.8831 |
| 3vvs-assembly1.cif.gz_A | 1 | 431 | 7 | 441 | 0.789 |
0.8801 |
| 6fv7-assembly1.cif.gz_B | 3 | 431 | 1 | 415 | 0.7878 |
0.8805 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PJB9-F1-model_v4 | 1 | 504 | 1 | 536 | 0.8302 |
0.8733 |
| AF-Q9Z7H5-F1-model_v4 | 1 | 504 | 1 | 540 | 0.826 |
0.877 |
| AF-Q46378-F1-model_v4 | 1 | 504 | 1 | 536 | 0.8233 |
0.867 |
| AF-Q6HLG9-F1-model_v4 | 1 | 431 | 2 | 446 | 0.8164 |
0.9161 |
| AF-Q81G28-F1-model_v4 | 1 | 431 | 2 | 446 | 0.8159 |
0.9146 |
| AF-Q8CUL5-F1-model_v4 | 1 | 431 | 2 | 446 | 0.8156 |
0.9101 |
| AF-Q63DZ4-F1-model_v4 | 1 | 431 | 2 | 446 | 0.8147 |
0.9144 |
| AF-Q81T85-F1-model_v4 | 1 | 431 | 2 | 446 | 0.8112 |
0.911 |
| AF-Q5KZL2-F1-model_v4 | 1 | 433 | 2 | 447 | 0.81 |
0.9075 |
| AF-Q73BB8-F1-model_v4 | 1 | 431 | 2 | 446 | 0.8094 |
0.91 |