PROTEIN: Rep_148_c_23_29
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Protein File & Metadata
Source:
Rep_148_c_23_29.pdb
Genome ID:
Protein ID:
Rep_148_c_23_29
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Protein Sequence
MRYFKTEKYR HDALFRVRVI ATVIIVAVAI TMITRLFPAS KDDLGRCVCH VDGYSQLCVT 60 NGRDTVVARQ DSISQVGVWA DKHWWWPSCR GRVLTVAQGE PSTCEADRRN VDNIEQKINI 120 VTDSIKRIIA RNEIEQKEIN YYFRSHGVQD EGYMKIAQHA ERQKKETDSL KRTFLILKKY 180 KPRHGDTLKR RYLLWVSWRD RDGKLQTEKC KEAITDVACA GEPFVVQTCQ KTKPRGVYAV 240 RNIPWRVYRK TNVITVTPVA PNAVMKRKAV LVPGRSVDGR LRDVPELFAQ DGSPVFNAYG 300 EFLGLVYKNR IARIKK 316
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2K9HC00-F1-model_v4 | GH25 | 2 | 291 | 1 | 271 | 0.4643 |
0.6928 |
| AF-A0A1B1IA15-F1-model_v4 | GH25 | 8 | 291 | 7 | 271 | 0.4542 |
0.6891 |
| AF-A0A7D4KGY5-F1-model_v4 | GH25 | 8 | 292 | 7 | 272 | 0.4471 |
0.6765 |
| A0A137SZY8 | GH25 | 4 | 290 | 1 | 268 | 0.4429 |
0.6647 |
| AF-A0A2D3L624-F1-model_v4 | GH25 | 6 | 263 | 5 | 271 | 0.4427 |
0.6863 |
| AF-A0A0K1NKZ3-F1-model_v4 | GH25 | 8 | 292 | 7 | 270 | 0.4403 |
0.669 |
| AF-A0A2D3LS21-F1-model_v4 | GH25 | 8 | 292 | 7 | 267 | 0.436 |
0.6711 |
| AF-A0A2D3M369-F1-model_v4 | GH25 | 9 | 263 | 7 | 272 | 0.4352 |
0.6842 |
| AF-A0A1P8JJV0-F1-model_v4 | GH25 | 8 | 293 | 7 | 267 | 0.4348 |
0.6668 |
| A0A6N3E4Q6 | GH25 | 8 | 316 | 38 | 363 | 0.4336 |
0.6342 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A137SZY8 | GH25 | 4 | 290 | 1 | 268 | 0.4429 |
0.6647 |
| A0A6N3E4Q6 | GH25 | 8 | 316 | 38 | 363 | 0.4336 |
0.6342 |
| A0A2D3NDJ4 | GH25 | 8 | 260 | 7 | 266 | 0.4308 |
0.6775 |
| D8DXD7 | GH25 | 18 | 290 | 1 | 264 | 0.4127 |
0.6277 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.