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PROTEIN: Rep_1353_c_15_56

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Protein File & Metadata
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Source:
Rep_1353_c_15_56.pdb
Genome ID:
Rep_1353
Protein ID:
Rep_1353_c_15_56

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRDGNIFDL   VDKNTITASS   NISIWSGNGP   DLILDDSEDT   LFHSNQYSVD   GYGDVYFKFE 60
EPRVINKIEF   LTRHLNSNNG   RIDQYEILYK   NGNFDASWIS   IYQSEITAEK   GWKIAEFQDV 120
LVSEICIRVH   RSYGNWIVMN   DIKFYLNINV   ENDLKNIFES   LECLAVKSQI   RLKEISILKD 180
KYQDNLEMVN   LLNVGRYLWL   NNNEVSRKKL   KFIKSDVNKE   EYFAALKIKQ   NLSIIPTGIT 240
FKAKKEYLII   SIEDITLYIV   DNFENLRNKK   IEIKKGVNTV   YLKEDTAEIF   LIDTIDKNIE 300
MVIFNADLVK   NYTAGKVEYK   EFFKENTKEL   GLVEGKNFIC   QLNRKEIENL   YNEFEFLQSI 360
ENLDTILNYI   YFLLNRNEYY   HVSPFKRVLI   QGVNNNIVEQ   KDTQDGSYTL   FGGMSRLMFN 420
KTIEELANPN   FCRVIAKDFI   GEHEGNTAVQ   ELLVFLLTKE   LEFRYSRVMI   IPEDNQKALW 480
IKLRLFFNSD   RFLPNLYKKL   QAHNFEGATN   HLEKIVLWIV   EILQRDVSRY   FIENGYDISS 540
EILSQCNEYP   ELAIDLNRVN   FSNYKELIEE   EIVIINENYK   RNLEGNI 587
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q6QR59-F1-model_v4 204 559 518 903 0.4019 0.775
AF-A6NFQ2-F1-model_v4 204 560 525 913 0.4018 0.7734
AF-Q9Y4C2-F1-model_v4 204 559 526 912 0.4017 0.777
AF-Q921K8-F1-model_v4 204 560 526 914 0.4012 0.7714
AF-Q6P6V7-F1-model_v4 204 559 518 903 0.401 0.7731
AF-X1WER5-F1-model_v4 204 559 519 905 0.4007 0.7697
AF-D3ZEW3-F1-model_v4 204 560 526 914 0.4004 0.7698
AF-Q8BNE1-F1-model_v4 204 559 526 915 0.3999 0.7738
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-M1QJQ3-F1-model_v4 CBM32 205 587 32 572 0.5391 0.804
AF-A0A1W6WKU4-F1-model_v4 CBM32 205 587 46 586 0.534 0.8051
AF-B7HIS0-F1-model_v4 CBM32 205 587 46 586 0.5331 0.8045
AF-A0A858MPM2-F1-model_v4 CBM32 159 587 44 588 0.5281 0.7288
AF-A0A7T4UJZ6-F1-model_v4 CBM32 206 564 38 448 0.5197 0.8292
AF-A0A1W6AHS2-F1-model_v4 CBM32 168 587 39 573 0.4908 0.7469
AF-M1R5U6-F1-model_v4 CBM32 26 587 25 573 0.4887 0.5848
AF-A0A0D3VA57-F1-model_v4 CBM32 , CBM51 27 574 4 451 0.4875 0.7014
AF-A0A1W6WYA0-F1-model_v4 CBM32 27 587 25 573 0.4862 0.5818
AF-A0A5P8E878-F1-model_v4 CBM0 118 572 287 772 0.4828 0.7318
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2L1TVG6 CBM5 190 571 31 445 0.5271 0.7964
WDF69550.1 CBM32 206 564 40 450 0.518 0.8272
UDF37680.1 CBM13 204 564 213 630 0.4875 0.799
A0A0U2Z3R3 CBM13 204 563 226 639 0.4875 0.8075
A0A174NKF2 CBM32 90 578 282 877 0.487 0.6948
A9VUM0 CBM5 199 587 49 606 0.4833 0.7942
I3ZZ84 CBM32 150 578 369 911 0.4802 0.7852
A0A0B7IIB9 CBM32 153 571 367 866 0.4783 0.8047
A5ZEQ5 CBM32 150 570 378 865 0.4727 0.7929
I8UVZ8 CBM32 153 571 375 854 0.472 0.7895
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7yx8-assembly2.cif.gz_B 94 561 1 438 0.5945 0.6906
5ev7-assembly1.cif.gz_A 206 570 1 401 0.5751 0.8255
5kd2-assembly1.cif.gz_A 62 574 15 523 0.5742 0.6705
4fca-assembly1.cif.gz_A 206 570 1 401 0.5736 0.8231
5kd8-assembly1.cif.gz_A 205 578 5 531 0.5625 0.832
6xsx-assembly1.cif.gz_A 206 571 4 491 0.5595 0.8161
5kdj-assembly1.cif.gz_B 208 574 1 492 0.5564 0.8103
5kds-assembly1.cif.gz_A 205 574 1 503 0.5534 0.8075
5kdj-assembly2.cif.gz_A 208 574 1 489 0.5532 0.8016
6xt1-assembly4.cif.gz_D 206 572 1 504 0.5523 0.8106
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5XHI4-F1-model_v4 197 560 505 895 0.4059 0.7627
AF-A6QLU7-F1-model_v4 204 559 525 911 0.4036 0.7791
AF-Q6QR59-F1-model_v4 204 559 518 903 0.4019 0.775
AF-A6NFQ2-F1-model_v4 204 560 525 913 0.4018 0.7734
AF-Q9Y4C2-F1-model_v4 204 559 526 912 0.4017 0.777
AF-Q5R8R3-F1-model_v4 204 560 526 913 0.4014 0.7741
AF-Q921K8-F1-model_v4 204 560 526 914 0.4012 0.7714
AF-Q6P6V7-F1-model_v4 204 559 518 903 0.401 0.7731
AF-A5PJN5-F1-model_v4 204 560 525 913 0.4007 0.7719
AF-Q8BNE1-F1-model_v4 204 559 526 915 0.3999 0.7738
Download Full SwissProt Results