PROTEIN: Rep_1351_c_11_41
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Protein File & Metadata
Source:
Rep_1351_c_11_41.pdb
Genome ID:
Protein ID:
Rep_1351_c_11_41
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Protein Sequence
MKKIIKTLFY LFCISTLCFA EEEIENTRDR GIDKMNFYIP VNKRNKYSNF TELDIRKDKN 60 IYKWTMADGY QTLGNNWDIQ YKIEREYHVE KKTKAKSHIW DNEIYFLKYH NPINFAGKTF 120 QHKTVLGIKH YEGEYSGNRD NQYYKLYVGQ KFSRFFNLGK GGTYIEFETD INKVFGRKKD 180 GYSLLASLKG TSNIGYGVQF SNVLEYEYLN YNQYSNAHKT KWETILRWTY EINENIAFSP 240 EVTFKVEKYN NSKENYLIES SAGPYVLFTK NINDDFRVYG KVGVPVFRKD ESKAEGYRYS 300 KSQTSAYGKI GFEYIF 316
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P76045-F1-model_v4 | 31 | 316 | 11 | 301 | 0.6524 |
0.7294 |
| AF-Q47534-F1-model_v4 | 43 | 316 | 20 | 257 | 0.582 |
0.7128 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2iwv-assembly2.cif.gz_B | 42 | 316 | 2 | 277 | 0.6481 |
0.725 |
| 2wvp-assembly1.cif.gz_A | 42 | 316 | 1 | 260 | 0.6381 |
0.7307 |
| 7q5c-assembly1.cif.gz_XXX | 42 | 316 | 2 | 254 | 0.635 |
0.7333 |
| 4d5d-assembly2.cif.gz_B | 42 | 316 | 5 | 309 | 0.6347 |
0.7431 |
| 2f1c-assembly1.cif.gz_X | 42 | 316 | 1 | 250 | 0.631 |
0.7343 |
| 4v3g-assembly1.cif.gz_A | 29 | 316 | 6 | 330 | 0.6245 |
0.7228 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P76045-F1-model_v4 | 31 | 316 | 11 | 301 | 0.6524 |
0.7294 |
| AF-Q47534-F1-model_v4 | 43 | 316 | 20 | 257 | 0.582 |
0.7128 |
| AF-P0DTW8-F1-model_v4 | 21 | 313 | 149 | 503 | 0.5559 |
0.7413 |
| AF-Q4QLR4-F1-model_v4 | 20 | 315 | 127 | 486 | 0.5549 |
0.7237 |
| AF-P14667-F1-model_v4 | 1 | 316 | 1 | 258 | 0.548 |
0.6582 |
| AF-Q48221-F1-model_v4 | 26 | 314 | 12 | 353 | 0.537 |
0.6351 |
| AF-O83831-F1-model_v4 | 29 | 316 | 129 | 425 | 0.4817 |
0.6477 |